Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.68□□□□□ -1.66
CTSDP07339 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.68□□□□□ -1.66
CTSDP07339 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.68□□□□□ -1.66
CTSDP07339 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 RNA5SP232-201ENST00000364144 119 ntBASIC4.68□□□□□ -1.66
CTSDP07339 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.68□□□□□ -1.66
CTSDP07339 NIFKP3-201ENST00000417799 865 ntBASIC4.68□□□□□ -1.66
CTSDP07339 AC092865.3-201ENST00000425390 1026 ntBASIC4.68□□□□□ -1.66
CTSDP07339 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.68□□□□□ -1.66
CTSDP07339 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.68□□□□□ -1.66
CTSDP07339 CLNS1AP1-201ENST00000435954 682 ntBASIC4.68□□□□□ -1.66
CTSDP07339 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.68□□□□□ -1.66
CTSDP07339 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.68□□□□□ -1.66
CTSDP07339 GAPDHP14-201ENST00000450472 937 ntBASIC4.68□□□□□ -1.66
CTSDP07339 OR52E3P-201ENST00000452083 936 ntBASIC4.68□□□□□ -1.66
CTSDP07339 PPIAP7-201ENST00000454070 489 ntBASIC4.68□□□□□ -1.66
CTSDP07339 YRDCP3-201ENST00000456507 480 ntBASIC4.68□□□□□ -1.66
CTSDP07339 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.68□□□□□ -1.66
CTSDP07339 AL049874.2-201ENST00000492636 288 ntBASIC4.68□□□□□ -1.66
CTSDP07339 AC106822.1-201ENST00000502647 526 ntBASIC4.68□□□□□ -1.66
CTSDP07339 AC112484.3-201ENST00000505910 329 ntBASIC4.68□□□□□ -1.66
CTSDP07339 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.68□□□□□ -1.66
CTSDP07339 AP000620.1-201ENST00000527147 504 ntBASIC4.68□□□□□ -1.66
CTSDP07339 OR5AM1P-201ENST00000532136 1032 ntBASIC4.68□□□□□ -1.66
CTSDP07339 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.68□□□□□ -1.66
CTSDP07339 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.68□□□□□ -1.66
CTSDP07339 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
CTSDP07339 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 AC096996.1-201ENST00000563813 325 ntBASIC4.68□□□□□ -1.66
CTSDP07339 AC106730.2-201ENST00000566641 540 ntBASIC4.68□□□□□ -1.66
CTSDP07339 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.68□□□□□ -1.66
CTSDP07339 SETP3-201ENST00000581726 813 ntBASIC4.68□□□□□ -1.66
CTSDP07339 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.68□□□□□ -1.66
CTSDP07339 AC073333.2-201ENST00000603589 769 ntBASIC4.68□□□□□ -1.66
CTSDP07339 AL136131.3-201ENST00000607600 188 ntBASIC4.68□□□□□ -1.66
CTSDP07339 AC073389.3-201ENST00000609434 935 ntBASIC4.68□□□□□ -1.66
CTSDP07339 AC092681.3-201ENST00000609463 678 ntBASIC4.68□□□□□ -1.66
CTSDP07339 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.68□□□□□ -1.66
CTSDP07339 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.68□□□□□ -1.66
CTSDP07339 uc_338.7-201ENST00000621834 124 ntBASIC4.68□□□□□ -1.66
CTSDP07339 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.68□□□□□ -1.66
CTSDP07339 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.68□□□□□ -1.66
CTSDP07339 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.68□□□□□ -1.66
CTSDP07339 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.68□□□□□ -1.66
CTSDP07339 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
CTSDP07339 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.68□□□□□ -1.66
CTSDP07339 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.68□□□□□ -1.66
CTSDP07339 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 AC008079.2-201ENST00000623543 20396 ntBASIC4.68□□□□□ -1.66
CTSDP07339 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTSDP07339 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CTSDP07339 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CTSDP07339 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.67□□□□□ -1.66
CTSDP07339 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.67□□□□□ -1.66
CTSDP07339 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CTSDP07339 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CTSDP07339 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTSDP07339 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTSDP07339 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CTSDP07339 AC011755.1-201ENST00000623763 2049 ntBASIC4.67□□□□□ -1.66
CTSDP07339 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.67□□□□□ -1.66
CTSDP07339 RNA5SP279-201ENST00000365513 117 ntBASIC4.67□□□□□ -1.66
CTSDP07339 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CTSDP07339 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CTSDP07339 EI24P3-201ENST00000399046 1062 ntBASIC4.67□□□□□ -1.66
CTSDP07339 RN7SKP86-201ENST00000410454 332 ntBASIC4.67□□□□□ -1.66
CTSDP07339 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.67□□□□□ -1.66
CTSDP07339 GAPDHP48-201ENST00000436626 961 ntBASIC4.67□□□□□ -1.66
CTSDP07339 AC023141.3-201ENST00000436698 278 ntBASIC4.67□□□□□ -1.66
CTSDP07339 TCEA1P3-201ENST00000443005 880 ntBASIC4.67□□□□□ -1.66
CTSDP07339 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.67□□□□□ -1.66
CTSDP07339 TIMM8BP2-201ENST00000445940 251 ntBASIC4.67□□□□□ -1.66
CTSDP07339 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CTSDP07339 GEMIN2P1-201ENST00000454246 752 ntBASIC4.67□□□□□ -1.66
CTSDP07339 AZGP1P2-201ENST00000454506 345 ntBASIC4.67□□□□□ -1.66
CTSDP07339 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.67□□□□□ -1.66
CTSDP07339 UBFD1P1-201ENST00000473259 814 ntBASIC4.67□□□□□ -1.66
CTSDP07339 COX6B1P2-201ENST00000489624 230 ntBASIC4.67□□□□□ -1.66
CTSDP07339 ENPP7P11-201ENST00000505915 627 ntBASIC4.67□□□□□ -1.66
CTSDP07339 AC091912.1-201ENST00000511351 248 ntBASIC4.67□□□□□ -1.66
CTSDP07339 GAPDHP71-201ENST00000511530 1003 ntBASIC4.67□□□□□ -1.66
CTSDP07339 HMGN1P17-201ENST00000513734 295 ntBASIC4.67□□□□□ -1.66
CTSDP07339 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CTSDP07339 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.67□□□□□ -1.66
CTSDP07339 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.67□□□□□ -1.66
CTSDP07339 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CTSDP07339 AC004232.2-201ENST00000574245 821 ntBASIC4.67□□□□□ -1.66
CTSDP07339 MIR3154-201ENST00000577829 84 ntBASIC4.67□□□□□ -1.66
CTSDP07339 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.67□□□□□ -1.66
CTSDP07339 AC009237.13-201ENST00000603193 276 ntBASIC4.67□□□□□ -1.66
CTSDP07339 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.67□□□□□ -1.66
CTSDP07339 MIR6889-201ENST00000613185 59 ntBASIC4.67□□□□□ -1.66
CTSDP07339 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms