Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 OR6M2P-201ENST00000529831 871 ntBASIC8.5□□□□□ -1.05
RNF40O75150 AC027026.1-201ENST00000532323 742 ntBASIC8.5□□□□□ -1.05
RNF40O75150 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC8.5□□□□□ -1.05
RNF40O75150 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 AC008055.1-201ENST00000547032 609 ntBASIC8.5□□□□□ -1.05
RNF40O75150 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.5□□□□□ -1.05
RNF40O75150 AC069240.2-201ENST00000550242 609 ntBASIC8.5□□□□□ -1.05
RNF40O75150 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC8.5□□□□□ -1.05
RNF40O75150 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC8.5□□□□□ -1.05
RNF40O75150 NIFKP8-201ENST00000560500 874 ntBASIC8.5□□□□□ -1.05
RNF40O75150 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC8.5□□□□□ -1.05
RNF40O75150 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC8.5□□□□□ -1.05
RNF40O75150 AC137800.2-201ENST00000574375 120 ntBASIC8.5□□□□□ -1.05
RNF40O75150 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC8.5□□□□□ -1.05
RNF40O75150 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 AC093063.1-201ENST00000599317 363 ntBASIC8.5□□□□□ -1.05
RNF40O75150 RN7SL715P-201ENST00000606972 286 ntBASIC8.5□□□□□ -1.05
RNF40O75150 AC006238.1-201ENST00000609787 534 ntBASIC8.5□□□□□ -1.05
RNF40O75150 AC016876.3-201ENST00000610459 426 ntBASIC8.5□□□□□ -1.05
RNF40O75150 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 AC108479.2-201ENST00000617314 601 ntBASIC8.5□□□□□ -1.05
RNF40O75150 RHOXF1P2-201ENST00000635431 502 ntBASIC8.5□□□□□ -1.05
RNF40O75150 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 AL449283.1-201ENST00000602631 3403 ntBASIC8.5□□□□□ -1.05
RNF40O75150 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
RNF40O75150 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC8.5□□□□□ -1.05
RNF40O75150 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 ANKRD62P1-201ENST00000434304 1623 ntBASIC8.5□□□□□ -1.05
RNF40O75150 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.5□□□□□ -1.05
RNF40O75150 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RNF40O75150 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC8.5□□□□□ -1.05
RNF40O75150 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.49□□□□□ -1.05
RNF40O75150 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC8.49□□□□□ -1.05
RNF40O75150 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC8.49□□□□□ -1.05
RNF40O75150 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
RNF40O75150 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.49□□□□□ -1.05
RNF40O75150 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC8.49□□□□□ -1.05
RNF40O75150 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
RNF40O75150 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.49□□□□□ -1.05
RNF40O75150 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.49□□□□□ -1.05
RNF40O75150 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
RNF40O75150 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
RNF40O75150 RNU6-474P-201ENST00000384243 107 ntBASIC8.49□□□□□ -1.05
RNF40O75150 MIR559-201ENST00000385188 96 ntBASIC8.49□□□□□ -1.05
RNF40O75150 SNORA57.2-201ENST00000391265 128 ntBASIC8.49□□□□□ -1.05
RNF40O75150 AL122016.1-201ENST00000403365 367 ntBASIC8.49□□□□□ -1.05
RNF40O75150 AL354719.1-201ENST00000406535 843 ntBASIC8.49□□□□□ -1.05
RNF40O75150 RNU2-47P-201ENST00000410649 186 ntBASIC8.49□□□□□ -1.05
RNF40O75150 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC8.49□□□□□ -1.05
RNF40O75150 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC8.49□□□□□ -1.05
RNF40O75150 FDPSP1-201ENST00000424976 1071 ntBASIC8.49□□□□□ -1.05
RNF40O75150 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC8.49□□□□□ -1.05
RNF40O75150 AL365400.1-201ENST00000431854 640 ntBASIC8.49□□□□□ -1.05
RNF40O75150 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC8.49□□□□□ -1.05
RNF40O75150 TBL1YP1-201ENST00000440297 1026 ntBASIC8.49□□□□□ -1.05
RNF40O75150 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC8.49□□□□□ -1.05
RNF40O75150 FABP3P2-201ENST00000453169 399 ntBASIC8.49□□□□□ -1.05
RNF40O75150 OR7E7P-201ENST00000455678 1012 ntBASIC8.49□□□□□ -1.05
RNF40O75150 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC8.49□□□□□ -1.05
RNF40O75150 KCTD9P5-201ENST00000504141 1170 ntBASIC8.49□□□□□ -1.05
RNF40O75150 ADI1P2-201ENST00000514945 429 ntBASIC8.49□□□□□ -1.05
RNF40O75150 OR7E1P-201ENST00000533891 958 ntBASIC8.49□□□□□ -1.05
RNF40O75150 AC090424.1-201ENST00000535243 736 ntBASIC8.49□□□□□ -1.05
RNF40O75150 AC023080.1-201ENST00000551663 931 ntBASIC8.49□□□□□ -1.05
RNF40O75150 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
RNF40O75150 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
RNF40O75150 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC8.49□□□□□ -1.05
RNF40O75150 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 MIR4503-201ENST00000582187 83 ntBASIC8.49□□□□□ -1.05
RNF40O75150 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC8.49□□□□□ -1.05
RNF40O75150 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC8.49□□□□□ -1.05
RNF40O75150 AC023513.1-201ENST00000604396 691 ntBASIC8.49□□□□□ -1.05
RNF40O75150 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC8.49□□□□□ -1.05
RNF40O75150 AC131159.2-201ENST00000613236 702 ntBASIC8.49□□□□□ -1.05
RNF40O75150 PFN1P2-202ENST00000621347 397 ntBASIC8.49□□□□□ -1.05
RNF40O75150 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC8.49□□□□□ -1.05
RNF40O75150 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RNF40O75150 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms