Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
UPK1AO00322 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.33□□□□□ -1.56
UPK1AO00322 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
UPK1AO00322 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UPK1AO00322 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
UPK1AO00322 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
UPK1AO00322 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
UPK1AO00322 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.33□□□□□ -1.56
UPK1AO00322 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
UPK1AO00322 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.32□□□□□ -1.56
UPK1AO00322 AC018809.2-201ENST00000602436 3823 ntBASIC5.32□□□□□ -1.56
UPK1AO00322 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1AO00322 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.32□□□□□ -1.56
UPK1AO00322 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1AO00322 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1AO00322 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.32□□□□□ -1.56
UPK1AO00322 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1AO00322 AC007842.1-201ENST00000597336 2039 ntBASIC5.32□□□□□ -1.56
UPK1AO00322 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
UPK1AO00322 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1AO00322 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
UPK1AO00322 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.32□□□□□ -1.56
UPK1AO00322 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1AO00322 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.32□□□□□ -1.56
UPK1AO00322 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.32□□□□□ -1.56
UPK1AO00322 NENFP3-201ENST00000503735 313 ntBASIC5.32□□□□□ -1.56
UPK1AO00322 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.32□□□□□ -1.56
UPK1AO00322 RNA5SP271-201ENST00000516700 88 ntBASIC5.32□□□□□ -1.56
UPK1AO00322 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.32□□□□□ -1.56
UPK1AO00322 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.32□□□□□ -1.56
UPK1AO00322 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.32□□□□□ -1.56
UPK1AO00322 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.32□□□□□ -1.56
UPK1AO00322 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.32□□□□□ -1.56
UPK1AO00322 AGGF1P7-201ENST00000562369 913 ntBASIC5.32□□□□□ -1.56
UPK1AO00322 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.32□□□□□ -1.56
UPK1AO00322 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.32□□□□□ -1.56
UPK1AO00322 AC063977.5-201ENST00000601044 974 ntBASIC5.32□□□□□ -1.56
UPK1AO00322 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.32□□□□□ -1.56
UPK1AO00322 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.32□□□□□ -1.56
UPK1AO00322 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.32□□□□□ -1.56
UPK1AO00322 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.32□□□□□ -1.56
UPK1AO00322 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
UPK1AO00322 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
UPK1AO00322 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1AO00322 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.32□□□□□ -1.56
UPK1AO00322 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
UPK1AO00322 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1AO00322 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1AO00322 GTF2IP4-201ENST00000453092 2054 ntBASIC5.32□□□□□ -1.56
UPK1AO00322 NEPNP-201ENST00000404786 1371 ntBASIC5.31□□□□□ -1.56
UPK1AO00322 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
UPK1AO00322 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
UPK1AO00322 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
UPK1AO00322 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1AO00322 AL121886.1-201ENST00000358609 435 ntBASIC5.31□□□□□ -1.56
UPK1AO00322 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
UPK1AO00322 U3.28-201ENST00000391249 210 ntBASIC5.31□□□□□ -1.56
UPK1AO00322 AC245060.4-201ENST00000413293 1121 ntBASIC5.31□□□□□ -1.56
UPK1AO00322 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.31□□□□□ -1.56
UPK1AO00322 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.31□□□□□ -1.56
UPK1AO00322 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.31□□□□□ -1.56
UPK1AO00322 AP006222.1-205ENST00000450734 457 ntBASIC5.31□□□□□ -1.56
UPK1AO00322 CBX1P2-201ENST00000453841 458 ntBASIC5.31□□□□□ -1.56
UPK1AO00322 TAAR4P-201ENST00000454843 1039 ntBASIC5.31□□□□□ -1.56
UPK1AO00322 AC022215.1-201ENST00000481770 362 ntBASIC5.31□□□□□ -1.56
UPK1AO00322 PFN1P8-201ENST00000497012 543 ntBASIC5.31□□□□□ -1.56
UPK1AO00322 RN7SKP70-201ENST00000516655 271 ntBASIC5.31□□□□□ -1.56
UPK1AO00322 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.31□□□□□ -1.56
UPK1AO00322 NANOGNBP2-201ENST00000544753 553 ntBASIC5.31□□□□□ -1.56
UPK1AO00322 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.31□□□□□ -1.56
UPK1AO00322 AL049840.6-201ENST00000604583 345 ntBASIC5.31□□□□□ -1.56
UPK1AO00322 AC092944.2-201ENST00000605443 889 ntBASIC5.31□□□□□ -1.56
UPK1AO00322 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.31□□□□□ -1.56
UPK1AO00322 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1AO00322 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
UPK1AO00322 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1AO00322 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1AO00322 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1AO00322 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
UPK1AO00322 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1AO00322 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.3□□□□□ -1.56
UPK1AO00322 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
UPK1AO00322 AC068870.1-201ENST00000563737 2455 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1AO00322 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
UPK1AO00322 RNA5SP30-201ENST00000365552 115 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.3□□□□□ -1.56
UPK1AO00322 NENFP1-201ENST00000419476 466 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.3□□□□□ -1.56
UPK1AO00322 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.3□□□□□ -1.56
UPK1AO00322 SETP9-201ENST00000423837 832 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 AL022331.1-201ENST00000429025 477 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.3□□□□□ -1.56
UPK1AO00322 HMGB3P24-201ENST00000433260 622 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.3□□□□□ -1.56
UPK1AO00322 HMGN1P2-201ENST00000445197 310 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1AO00322 AC011476.1-201ENST00000466725 307 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 UBFD1P1-201ENST00000473259 814 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 SNORA70.20-201ENST00000516848 126 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms