Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 BX119321.1-201ENST00000428912 797 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 RPS3AP38-201ENST00000435889 763 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AC015983.1-201ENST00000441577 373 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 RPL36AP39-201ENST00000445859 318 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AC026782.2-201ENST00000510845 636 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 SCARNA6.1-201ENST00000516989 238 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AP001496.3-201ENST00000580230 913 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AC010615.3-201ENST00000597319 394 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AL136370.1-201ENST00000608166 691 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AC127024.6-201ENST00000621598 424 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AL355834.1-201ENST00000556602 3965 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AC027279.4-201ENST00000624371 2072 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 UGT2B24P-201ENST00000514441 1597 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AC092070.2-203ENST00000598377 3644 ntBASIC6.21□□□□□ -1.41
SNX9Q9Y5X1 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SNX9Q9Y5X1 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SNX9Q9Y5X1 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
SNX9Q9Y5X1 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
SNX9Q9Y5X1 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 DNM1P47-203ENST00000571780 12667 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 TMSB4XP4-201ENST00000323496 618 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 HMGB3P24-201ENST00000433260 622 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 SETP20-201ENST00000457046 852 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC004129.2-201ENST00000457229 287 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AL049829.1-201ENST00000465411 156 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 RPS17P15-201ENST00000475609 349 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC079080.1-201ENST00000479841 822 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 PPIAP19-201ENST00000486414 492 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC112184.1-201ENST00000505179 312 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC135626.1-201ENST00000556983 435 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC116158.1-201ENST00000560231 2129 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC090286.3-201ENST00000573133 187 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 RN7SL544P-201ENST00000617232 284 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 RN7SL763P-201ENST00000620922 284 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC103703.1-201ENST00000634783 663 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 MIR193BHG-214ENST00000641765 509 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 MAPK10-350ENST00000641777 965 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 ZNF101P1-201ENST00000435701 1720 ntBASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNX9Q9Y5X1 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 HMGB1P20-201ENST00000402555 677 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 SNORA81-201ENST00000408493 178 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 CASKP1-201ENST00000412870 582 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 CDY17P-201ENST00000414121 1282 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC019205.1-201ENST00000421830 730 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms