Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 RNU6-354P-201ENST00000383862 107 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 RNU6-610P-201ENST00000384264 107 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 GCNT1P4-201ENST00000404096 329 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AL096711.1-201ENST00000404780 554 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 HMGB1P13-201ENST00000406019 642 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 RPL7AP14-201ENST00000424041 802 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AL138899.2-201ENST00000439139 499 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AC092685.1-201ENST00000447960 1243 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 HMGB1P7-201ENST00000450921 612 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 CST12P-201ENST00000457644 362 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 RPS17P11-201ENST00000474297 293 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 CBX1P5-201ENST00000475330 559 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 OR4D12P-201ENST00000509361 911 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AC006512.2-201ENST00000543250 486 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AC134669.1-201ENST00000581275 672 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AL499605.1-201ENST00000604628 403 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AP004607.9-201ENST00000618202 316 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AC145207.9-201ENST00000623802 325 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AC024023.1-201ENST00000624530 922 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AL445984.1-201ENST00000637834 659 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AL359976.1-201ENST00000418655 3528 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 GUCY1B2-204ENST00000531898 1979 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC007342.5-201ENST00000571340 2142 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 RNU6-468P-201ENST00000384003 109 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 HMGB3P19-201ENST00000403971 560 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AL355615.1-201ENST00000406187 641 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC116036.1-201ENST00000412199 367 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC011242.1-201ENST00000433596 1158 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 RPL5P7-201ENST00000444235 813 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 RPS20P4-201ENST00000461659 355 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC092905.1-201ENST00000467527 949 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AP002453.1-201ENST00000492327 668 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 TPT1P8-201ENST00000510120 555 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 MAST4-IT1-201ENST00000514241 658 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC104115.2-201ENST00000523026 687 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 MTND1P6-201ENST00000523621 946 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC036111.2-201ENST00000533247 901 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC124916.2-201ENST00000604416 224 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC017076.1-201ENST00000607613 578 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms