Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AP005901.4-201ENST00000577336 569 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AC015674.1-201ENST00000578482 267 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AC100832.2-201ENST00000582080 776 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AC145423.1-201ENST00000605712 336 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 SNORA35B-201ENST00000607417 129 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 uc_338.33-201ENST00000614988 170 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AL162574.1-201ENST00000615702 950 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 MIR6503-201ENST00000622884 86 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AC092376.2-201ENST00000622621 4116 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 OR56A4-201ENST00000330728 1209 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 RNU4-44P-201ENST00000363050 141 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 RNU1-146P-201ENST00000364015 165 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AC092634.1-201ENST00000366505 199 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 MRPL32P1-201ENST00000406301 247 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 MTND2P12-201ENST00000417560 1252 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 RNF10P1-201ENST00000418589 369 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 RPL12P43-201ENST00000420608 499 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AC108479.1-201ENST00000431142 427 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 RPS7P3-201ENST00000443360 580 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 NPM1P9-201ENST00000453156 844 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AC099670.1-201ENST00000455141 783 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 NPM1P29-201ENST00000483112 803 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AC091544.1-201ENST00000484702 348 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 RPSAP51-201ENST00000497462 645 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AC093890.1-201ENST00000502554 540 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AC008629.2-201ENST00000503783 483 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AC105384.2-201ENST00000508433 640 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 RNU4-18P-201ENST00000516751 149 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 MIR4258-201ENST00000580920 91 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 MIR3936-201ENST00000584304 110 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 MIR7853-201ENST00000584820 132 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AL031429.2-201ENST00000602605 649 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 QTRT1P1-201ENST00000604344 1078 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 MIR8082-201ENST00000612488 81 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 MIR6731-201ENST00000614863 72 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 OR8G7P-201ENST00000616658 848 ntBASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP3Q9Y2W7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KCNIP3Q9Y2W7 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC4.79□□□□□ -1.64
KCNIP3Q9Y2W7 MTCO1P22-201ENST00000604619 1360 ntBASIC4.79□□□□□ -1.64
KCNIP3Q9Y2W7 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KCNIP3Q9Y2W7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.79□□□□□ -1.64
KCNIP3Q9Y2W7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KCNIP3Q9Y2W7 MTCO1P28-201ENST00000574177 1528 ntBASIC4.79□□□□□ -1.64
KCNIP3Q9Y2W7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms