Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 GEMIN2P2-201ENST00000418195 715 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AL139158.1-201ENST00000424719 340 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AC021876.1-201ENST00000425959 359 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AC002542.1-201ENST00000440683 193 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 NFU1P2-201ENST00000448700 469 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 RPL7P45-201ENST00000455851 743 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 MED28P7-201ENST00000456611 530 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 DSTNP2-201ENST00000504533 515 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 IGLVI-42-201ENST00000522485 381 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 NDUFA3P4-201ENST00000560814 250 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 EEF1B2P1-201ENST00000567221 672 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AP003392.5-201ENST00000607857 415 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AL365204.3-201ENST00000612448 685 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AL158196.1-201ENST00000616786 434 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 CDY7P-201ENST00000429883 1604 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 AL139805.2-201ENST00000455305 2433 ntBASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
PDZRN3Q9UPQ7 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 RNU6-332P-201ENST00000391193 108 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 NUP35P1-201ENST00000422734 947 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 AC008850.1-201ENST00000427546 362 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 AC073614.1-201ENST00000438690 650 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 RPL21P33-201ENST00000444831 484 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 CCNJP1-201ENST00000450600 1149 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 BX322784.1-201ENST00000455793 1077 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 RBM43P1-201ENST00000476891 1081 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 AC098818.1-201ENST00000478593 252 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 LINC00888-204ENST00000487386 421 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 AP001960.1-201ENST00000506494 658 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 IMPA1P1-201ENST00000510718 842 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 RN7SKP183-201ENST00000517169 324 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 MIR4310-201ENST00000582950 57 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 MIR4470-201ENST00000583453 72 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 PRR13P5-201ENST00000596581 442 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 AC009237.15-201ENST00000610252 501 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 AC009237.3-203ENST00000442128 3551 ntBASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PDZRN3Q9UPQ7 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC089998.1-201ENST00000548575 3141 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 MIR16-2-201ENST00000362117 81 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 Y_RNA.38-201ENST00000362617 102 ntBASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms