Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 RNA5SP387-201ENST00000364226 106 ntBASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 AL451063.1-201ENST00000450164 1133 ntBASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 AL603882.1-201ENST00000463059 681 ntBASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 RN7SL352P-201ENST00000466002 277 ntBASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 GTF2F2P1-201ENST00000511083 675 ntBASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 NDUFB4P12-201ENST00000513465 390 ntBASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 MIR5095-201ENST00000578844 88 ntBASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
RIMBP3Q9UFD9 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 SNORA11.1-201ENST00000408133 129 ntBASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 AL162739.1-201ENST00000450606 307 ntBASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 DPPA3P2-202ENST00000557188 1219 ntBASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 MIR4715-201ENST00000584117 79 ntBASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 IPO5-229ENST00000631030 192 ntTSL 5 BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 AC010478.1-201ENST00000601500 6762 ntBASIC8.66□□□□□ -1.02
RIMBP3Q9UFD9 RNU1-146P-201ENST00000364015 165 ntBASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 RNA5SP428-201ENST00000365129 132 ntBASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 CDC123-202ENST00000378900 933 ntTSL 5 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 AC025674.1-201ENST00000507074 324 ntBASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 SCARNA16.4-201ENST00000516956 187 ntBASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 OR8G5-201ENST00000524943 1041 ntBASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 AC069366.1-201ENST00000583159 838 ntBASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RIMBP3Q9UFD9 CCT8P1-201ENST00000413611 1657 ntBASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 AK3P5-201ENST00000432033 519 ntBASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 RPL23AP83-201ENST00000434984 473 ntBASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 RPS23P2-201ENST00000463671 415 ntBASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 AP002812.1-201ENST00000495378 474 ntBASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 AP001781.1-201ENST00000530977 207 ntBASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.65□□□□□ -1.03
RIMBP3Q9UFD9 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RIMBP3Q9UFD9 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RIMBP3Q9UFD9 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RIMBP3Q9UFD9 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC8.64□□□□□ -1.03
RIMBP3Q9UFD9 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms