Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC243960.7-201ENST00000623532 707 ntBASIC6.16□□□□□ -1.42
EBF3Q9H4W6 AC022919.1-201ENST00000624979 626 ntBASIC6.16□□□□□ -1.42
EBF3Q9H4W6 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 AC003992.1-201ENST00000635364 557 ntBASIC6.16□□□□□ -1.42
EBF3Q9H4W6 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 AL359955.1-201ENST00000455242 3275 ntBASIC6.16□□□□□ -1.42
EBF3Q9H4W6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
EBF3Q9H4W6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AL121835.1-201ENST00000404250 354 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC016739.1-201ENST00000405359 345 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC093155.2-201ENST00000420734 937 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 GAPDHP48-201ENST00000436626 961 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 OR13K1P-201ENST00000444577 975 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AL500527.1-201ENST00000448532 255 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 MTND2P3-201ENST00000452458 470 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC103563.5-201ENST00000455643 364 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 RPS26P39-201ENST00000469206 341 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 RNU6-415P-201ENST00000516252 97 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC091078.2-201ENST00000557145 559 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC010547.6-201ENST00000571789 193 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC015802.2-201ENST00000589690 189 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC245128.3-201ENST00000594721 748 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AL021368.3-201ENST00000607119 578 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC016590.3-201ENST00000611171 753 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC003001.2-201ENST00000616294 831 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 AC000095.2-202ENST00000637415 154 ntBASIC6.15□□□□□ -1.42
EBF3Q9H4W6 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 AC022164.1-201ENST00000568767 2673 ntBASIC6.15□□□□□ -1.43
EBF3Q9H4W6 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
EBF3Q9H4W6 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 RPL34P3-201ENST00000421454 338 ntBASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AC244033.1-201ENST00000426826 870 ntBASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms