Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 MTND5P26-201ENST00000426018 1752 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 RNU6-660P-201ENST00000364566 109 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 RNU4-12P-201ENST00000365233 139 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 MIR181A1-201ENST00000385026 110 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 RPL17P50-201ENST00000396131 546 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 RN7SKP39-201ENST00000410773 322 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC002524.1-201ENST00000411687 547 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 MEAF6P1-201ENST00000416092 327 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 RPSAP59-201ENST00000421048 890 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 GLRXP1-201ENST00000423261 334 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AL139158.1-201ENST00000424719 340 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AP003385.1-201ENST00000426387 893 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 SNX18P14-201ENST00000429308 574 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 SEPT7P5-201ENST00000434048 306 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC242426.1-201ENST00000435270 960 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 MTND1P28-201ENST00000435623 950 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 HMGB1P45-201ENST00000435986 653 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC015983.1-201ENST00000441577 373 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 BX005266.3-201ENST00000443013 1075 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 MTATP6P30-201ENST00000443540 664 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AL451074.4-201ENST00000447545 470 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 EPS15P1-201ENST00000448836 336 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 MTND3P10-201ENST00000450967 341 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 PNPLA4P1-201ENST00000458328 305 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 VPS26AP1-201ENST00000483197 979 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 SETP14-201ENST00000497538 873 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 DYNLL1P6-201ENST00000503440 264 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC008496.1-201ENST00000509131 295 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC146944.3-201ENST00000509969 371 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC114801.1-201ENST00000512633 297 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 OR4C2P-201ENST00000530855 1064 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 MIR4262-201ENST00000578394 54 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC012511.1-201ENST00000608140 449 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 Y_RNA.804-201ENST00000615262 101 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC243830.3-201ENST00000616810 376 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 TSHZ2-205ENST00000626626 670 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 CASC19-232ENST00000641480 1244 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AL391261.1-201ENST00000555712 1479 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 MTND4P23-201ENST00000447723 1363 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 MTCO1P6-201ENST00000481192 1384 ntBASIC6.95□□□□□ -1.3
BHLHE41Q9C0J9 AC061975.7-201ENST00000592016 2692 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms