Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC245028.1-201ENST00000423259 256 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 RPL30P3-201ENST00000424262 333 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 OR3B1P-201ENST00000437536 893 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC073046.1-201ENST00000441217 390 ntTSL 3 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 PRDX3P2-201ENST00000447051 611 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AL390726.1-201ENST00000451357 202 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 RPSAP18-201ENST00000453374 886 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AL161727.1-201ENST00000457409 530 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 RPL23AP24-201ENST00000458203 385 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 RPS4XP2-201ENST00000458402 793 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 RN7SL567P-201ENST00000462015 303 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 RN7SL454P-201ENST00000492744 243 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC027338.2-201ENST00000504382 526 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 RNU6-927P-201ENST00000516199 100 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC104117.3-201ENST00000519491 674 ntTSL 3 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 NXF1-208ENST00000531131 1023 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 RAB42P1-201ENST00000555078 316 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC133539.1-201ENST00000562644 420 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC136624.4-201ENST00000573044 370 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 MXRA7-206ENST00000589082 560 ntAPPRIS ALT2 TSL 4 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC020914.5-201ENST00000595339 329 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 PDE4C-213ENST00000598111 1284 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 Z93241.1-201ENST00000602478 664 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AL139339.2-201ENST00000608063 657 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AL627230.3-201ENST00000622239 192 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 COG6-212ENST00000630730 186 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 PCCB-214ENST00000478469 4502 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 ITGA7-213ENST00000555728 3930 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 TRIM16L-201ENST00000395671 1982 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC097374.1-202ENST00000582835 3329 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 PCDH20-201ENST00000409204 4778 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 BTNL2-201ENST00000374993 1368 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 KBTBD12-201ENST00000343941 4121 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC018992.1-201ENST00000523778 2149 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 CELF5-203ENST00000541430 4268 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 ATP1A3-201ENST00000302102 3597 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 C14orf159-223ENST00000522322 2856 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 ATP8B5P-202ENST00000423138 2157 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 GBP2-201ENST00000370466 2220 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 STYK1-201ENST00000075503 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF558-201ENST00000301475 3014 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 CYP2B6-201ENST00000324071 3054 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 KY-201ENST00000423778 2345 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 FAM60A-201ENST00000337682 3163 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 SMAD9-202ENST00000379826 5592 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 ARHGEF2-202ENST00000313695 4080 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 CALU-206ENST00000542996 4225 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF155-201ENST00000270014 2596 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF488-201ENST00000585316 3496 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 TUBB-205ENST00000327892 2670 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 IFIH1-201ENST00000263642 3595 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 ESYT1-201ENST00000267113 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 FAM131A-201ENST00000310585 3677 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 CYP8B1-202ENST00000437102 1896 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 TNIK-206ENST00000460047 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF449-202ENST00000370761 2051 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 TGFA-201ENST00000295400 4310 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 PLXNA4-204ENST00000423507 3314 ntTSL 2 BASIC5.62□□□□□ -1.51
KRTAP3-3Q9BYR6 POLR1E-201ENST00000377792 2229 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms