Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AP004607.3-201ENST00000530354 3915 ntBASIC8.45□□□□□ -1.06
SCAPERQ9BY12 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 MFSD8-239ENST00000641590 2479 ntBASIC8.45□□□□□ -1.06
SCAPERQ9BY12 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 PWAR1-201ENST00000624188 2414 ntBASIC8.45□□□□□ -1.06
SCAPERQ9BY12 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 PRNCR1-201ENST00000635449 12727 ntBASIC8.45□□□□□ -1.06
SCAPERQ9BY12 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 RNVU1-6-201ENST00000364688 164 ntBASIC8.45□□□□□ -1.06
SCAPERQ9BY12 RN7SKP6-201ENST00000364795 319 ntBASIC8.45□□□□□ -1.06
SCAPERQ9BY12 AL035419.1-201ENST00000397037 564 ntBASIC8.45□□□□□ -1.06
SCAPERQ9BY12 AC093162.1-201ENST00000419682 124 ntBASIC8.45□□□□□ -1.06
SCAPERQ9BY12 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 CDC42EP3P1-201ENST00000601004 764 ntBASIC8.45□□□□□ -1.06
SCAPERQ9BY12 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 CASC19-281ENST00000642118 1554 ntBASIC8.45□□□□□ -1.06
SCAPERQ9BY12 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
SCAPERQ9BY12 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 AC009831.5-201ENST00000624000 3189 ntBASIC8.44□□□□□ -1.06
SCAPERQ9BY12 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 AC022034.1-201ENST00000512867 2156 ntBASIC8.44□□□□□ -1.06
SCAPERQ9BY12 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 MIR551A-201ENST00000385042 96 ntBASIC8.44□□□□□ -1.06
SCAPERQ9BY12 RNU6ATAC21P-201ENST00000408656 126 ntBASIC8.44□□□□□ -1.06
SCAPERQ9BY12 AC104837.2-201ENST00000427236 424 ntBASIC8.44□□□□□ -1.06
SCAPERQ9BY12 EIF2S2P3-201ENST00000428356 999 ntBASIC8.44□□□□□ -1.06
SCAPERQ9BY12 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 AC006463.2-201ENST00000473326 348 ntBASIC8.44□□□□□ -1.06
SCAPERQ9BY12 RN7SL346P-201ENST00000491561 294 ntBASIC8.44□□□□□ -1.06
SCAPERQ9BY12 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 AL671862.1-201ENST00000515851 349 ntBASIC8.44□□□□□ -1.06
SCAPERQ9BY12 BRD9P1-201ENST00000529855 560 ntBASIC8.44□□□□□ -1.06
SCAPERQ9BY12 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 AC137695.1-201ENST00000604126 489 ntBASIC8.44□□□□□ -1.06
SCAPERQ9BY12 AL022394.1-201ENST00000606979 292 ntBASIC8.44□□□□□ -1.06
SCAPERQ9BY12 CYP4F35P-202ENST00000636121 390 ntBASIC8.44□□□□□ -1.06
SCAPERQ9BY12 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 AC016251.2-201ENST00000623393 3089 ntBASIC8.44□□□□□ -1.06
SCAPERQ9BY12 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SCAPERQ9BY12 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 RNU1-149P-201ENST00000390870 161 ntBASIC8.43□□□□□ -1.06
SCAPERQ9BY12 AP003170.5-201ENST00000397185 335 ntBASIC8.43□□□□□ -1.06
SCAPERQ9BY12 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 HMGB1P40-201ENST00000525121 540 ntBASIC8.43□□□□□ -1.06
SCAPERQ9BY12 AC079075.1-201ENST00000559543 878 ntBASIC8.43□□□□□ -1.06
SCAPERQ9BY12 AC018552.1-201ENST00000562099 811 ntBASIC8.43□□□□□ -1.06
SCAPERQ9BY12 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 AF230666.2-201ENST00000602328 725 ntBASIC8.43□□□□□ -1.06
SCAPERQ9BY12 IGLCOR22-2-201ENST00000605398 313 ntBASIC8.43□□□□□ -1.06
SCAPERQ9BY12 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
SCAPERQ9BY12 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 PANDAR-201ENST00000629595 1506 ntBASIC8.42□□□□□ -1.06
SCAPERQ9BY12 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms