Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC087203.2-201ENST00000526502 1587 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 TTTY25P-201ENST00000558356 1505 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 ZNF680P1-201ENST00000436625 1469 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 RPL5P20-201ENST00000403848 896 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 PUDPP1-201ENST00000421058 495 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC069157.1-201ENST00000421749 137 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 ELOCP14-201ENST00000428070 331 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 ELOCP7-201ENST00000439968 331 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 PGBD4P3-201ENST00000440731 581 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AL512605.1-202ENST00000441919 381 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AL451081.2-201ENST00000448115 933 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 VDAC2P4-201ENST00000452925 711 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AP005202.1-201ENST00000489915 867 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 RN7SL135P-201ENST00000490144 278 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AL449212.1-201ENST00000499853 517 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 KLRA1P-201ENST00000503499 986 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 MTCO2P30-201ENST00000503662 364 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC226119.2-201ENST00000513501 530 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 OR5D2P-201ENST00000524390 911 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 OR5AP1P-201ENST00000529730 940 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC009997.1-201ENST00000557862 129 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AL138976.2-201ENST00000563989 694 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AL391840.1-201ENST00000571144 367 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AC010200.2-201ENST00000605098 235 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 LINC01727-204ENST00000624385 940 ntTSL 5 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 AL132796.3-201ENST00000624703 900 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 EIF4BP2-201ENST00000416702 1794 ntBASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
DEPDC4Q8N2C3 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 AC241584.2-201ENST00000637142 2090 ntBASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 SLC9B1P3-201ENST00000452667 1334 ntBASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 RN7SKP222-201ENST00000410651 315 ntBASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 VDAC1P10-201ENST00000416715 891 ntBASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 RPL21P111-201ENST00000418453 477 ntBASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 AC092634.6-201ENST00000418558 192 ntBASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 AC111200.2-201ENST00000418877 505 ntBASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.37□□□□□ -1.23
DEPDC4Q8N2C3 CLIC4P3-201ENST00000422221 752 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms