Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MIR3154-201ENST00000577829 84 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 AC005244.1-201ENST00000582566 339 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 AC092266.1-201ENST00000610958 165 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 AC245014.3-201ENST00000618589 347 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 AC048341.3-201ENST00000619323 491 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 AC022400.9-201ENST00000623633 273 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.02□□□□□ -1.44
CCDC50Q8IVM0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 AC093225.1-201ENST00000506867 1408 ntBASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 RN7SKP279-201ENST00000411383 298 ntBASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 RNGTTP1-201ENST00000420965 728 ntBASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 AC019205.1-201ENST00000421830 730 ntBASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 GEMIN2P1-201ENST00000454246 752 ntBASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 AC093166.4-201ENST00000457867 318 ntBASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 AC018797.1-201ENST00000510791 255 ntBASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 GAPDHP71-201ENST00000511530 1003 ntBASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 SETP21-201ENST00000514799 892 ntBASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 AC021146.10-201ENST00000515628 706 ntBASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 RPA2P1-201ENST00000556557 721 ntBASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 MIR4776-2-201ENST00000580204 80 ntBASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 AC124916.2-201ENST00000604416 224 ntBASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CCDC50Q8IVM0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 AL137058.3-201ENST00000624531 3099 ntBASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 AL096711.1-201ENST00000404780 554 ntBASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 MIR1275-201ENST00000408770 80 ntBASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 DUTP1-201ENST00000493631 470 ntBASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 IGKV3D-25-201ENST00000519599 235 ntBASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 AC018809.2-201ENST00000602436 3823 ntBASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 AL136131.3-201ENST00000607600 188 ntBASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 MIR6809-201ENST00000612189 116 ntBASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 AL035661.1-201ENST00000620459 1144 ntBASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 AL353684.1-201ENST00000622677 1120 ntBASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC50Q8IVM0 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC50Q8IVM0 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6□□□□□ -1.45
CCDC50Q8IVM0 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC50Q8IVM0 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC50Q8IVM0 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
CCDC50Q8IVM0 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC50Q8IVM0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6□□□□□ -1.45
CCDC50Q8IVM0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CCDC50Q8IVM0 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC50Q8IVM0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CCDC50Q8IVM0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC50Q8IVM0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC50Q8IVM0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC50Q8IVM0 RNFT1P3-201ENST00000340898 1052 ntBASIC6□□□□□ -1.45
CCDC50Q8IVM0 AL354890.1-201ENST00000413730 346 ntBASIC6□□□□□ -1.45
CCDC50Q8IVM0 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CCDC50Q8IVM0 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms