Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 DDX6P1-205ENST00000441966 1436 ntBASIC6.06□□□□□ -1.44
VRK3Q8IV63 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
VRK3Q8IV63 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.06□□□□□ -1.44
VRK3Q8IV63 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VRK3Q8IV63 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.06□□□□□ -1.44
VRK3Q8IV63 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
VRK3Q8IV63 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC011416.1-201ENST00000514947 1732 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC009831.5-201ENST00000624000 3189 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 MTCO3P4-201ENST00000419236 787 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 PSMD10P2-201ENST00000432890 672 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 SNRPFP2-201ENST00000440710 251 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC007000.2-201ENST00000442564 487 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 EEF1B2P3-201ENST00000447718 678 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 OR6C72P-201ENST00000451403 892 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC112187.1-201ENST00000455837 479 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 FTH1P8-201ENST00000498161 514 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC018797.1-201ENST00000510791 255 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 UBTFL9-201ENST00000534504 1148 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 MRPS21P8-201ENST00000569196 235 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 MIR4701-201ENST00000583094 63 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 SMIM12P1-201ENST00000603004 274 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC021171.1-201ENST00000603137 706 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 AL160237.3-201ENST00000604114 1013 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC008555.7-201ENST00000605008 583 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 AL352984.2-201ENST00000611153 546 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC091304.6-201ENST00000619761 202 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC021422.1-201ENST00000621212 473 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 AP001962.1-201ENST00000624114 559 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AL161901.1-201ENST00000624954 3425 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 RNF19BPY-201ENST00000458209 1550 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
VRK3Q8IV63 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 AC007114.2-201ENST00000576014 4281 ntBASIC6.05□□□□□ -1.44
VRK3Q8IV63 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK3Q8IV63 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 SHQ1P1-201ENST00000437111 1544 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms