Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 CDH12P2-201ENST00000504393 298 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AL162632.2-201ENST00000553933 399 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC023968.1-201ENST00000560719 475 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 RN7SL753P-201ENST00000581238 290 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC006116.5-201ENST00000591936 559 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AL606834.3-201ENST00000602615 496 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC018618.2-201ENST00000604770 446 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 RPSAP75-201ENST00000605848 301 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AL136097.3-201ENST00000611097 505 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 TCL6_3.1-201ENST00000619064 137 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC024023.1-201ENST00000624530 922 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC073488.6-201ENST00000632293 754 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 LINC02495-203ENST00000636704 242 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC011815.2-201ENST00000618230 2021 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC068769.1-201ENST00000474767 2426 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 RPL31P11-201ENST00000426558 1558 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 RNU6-1005P-201ENST00000384519 107 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 DHFRP2-201ENST00000414224 547 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 OR6K4P-201ENST00000423179 955 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 MTCO2P23-201ENST00000425216 680 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AC020898.1-201ENST00000474167 787 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AC096571.1-202ENST00000506634 735 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 MTHFD2P4-201ENST00000515074 1025 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AC090826.1-203ENST00000569235 490 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AC106785.4-201ENST00000569492 412 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AL138895.2-201ENST00000603019 178 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AL157899.1-201ENST00000604110 936 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AC099785.1-201ENST00000605697 437 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 MIR6862-1-201ENST00000613016 70 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 MIR6862-2-201ENST00000614755 70 ntBASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC144BQ3MJ40 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AL161901.1-201ENST00000624954 3425 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms