Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
ATP7AQ04656 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.17□□□□□ -1.1
ATP7AQ04656 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
ATP7AQ04656 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC8.16□□□□□ -1.1
ATP7AQ04656 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
ATP7AQ04656 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ATP7AQ04656 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
ATP7AQ04656 ZNF840P-201ENST00000504759 1996 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC8.16□□□□□ -1.1
ATP7AQ04656 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ATP7AQ04656 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
ATP7AQ04656 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
ATP7AQ04656 AL035419.1-201ENST00000397037 564 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC8.16□□□□□ -1.1
ATP7AQ04656 AC068138.1-201ENST00000412635 217 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC8.16□□□□□ -1.1
ATP7AQ04656 AC093162.1-201ENST00000419682 124 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 AC093655.2-201ENST00000425735 631 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 TMEM183AP1-205ENST00000432739 290 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 AC009220.1-201ENST00000451614 275 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 RPS17P5-201ENST00000498293 408 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ATP7AQ04656 AC096754.1-201ENST00000508904 818 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 EIF3KP3-201ENST00000514461 639 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 UBE2Q2P10-201ENST00000514854 900 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.16□□□□□ -1.1
ATP7AQ04656 AC063949.1-201ENST00000552900 865 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC8.16□□□□□ -1.1
ATP7AQ04656 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC8.16□□□□□ -1.1
ATP7AQ04656 AC011447.4-201ENST00000587562 111 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 AF230666.2-201ENST00000602328 725 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 HIRAP1-201ENST00000605318 787 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
ATP7AQ04656 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
ATP7AQ04656 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ATP7AQ04656 AL589993.1-201ENST00000407450 2524 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.16□□□□□ -1.1
ATP7AQ04656 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC8.16□□□□□ -1.1
ATP7AQ04656 RAD17P2-201ENST00000451754 1977 ntBASIC8.16□□□□□ -1.1
ATP7AQ04656 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC8.16□□□□□ -1.1
ATP7AQ04656 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.16□□□□□ -1.1
ATP7AQ04656 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
ATP7AQ04656 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ATP7AQ04656 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ATP7AQ04656 INTS6P1-201ENST00000504674 2530 ntBASIC8.15□□□□□ -1.1
ATP7AQ04656 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC8.15□□□□□ -1.1
ATP7AQ04656 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ATP7AQ04656 AC013442.1-201ENST00000397347 228 ntBASIC8.15□□□□□ -1.1
ATP7AQ04656 AC211486.3-201ENST00000412694 621 ntBASIC8.15□□□□□ -1.1
ATP7AQ04656 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC8.15□□□□□ -1.1
ATP7AQ04656 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ATP7AQ04656 AC092647.3-201ENST00000443044 633 ntBASIC8.15□□□□□ -1.1
ATP7AQ04656 AL596266.1-201ENST00000448132 400 ntBASIC8.15□□□□□ -1.1
ATP7AQ04656 GYG1P1-201ENST00000460864 698 ntBASIC8.15□□□□□ -1.1
ATP7AQ04656 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC8.15□□□□□ -1.1
ATP7AQ04656 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC8.15□□□□□ -1.1
ATP7AQ04656 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC8.15□□□□□ -1.1
ATP7AQ04656 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC8.15□□□□□ -1.1
ATP7AQ04656 RN7SKP98-201ENST00000517070 156 ntBASIC8.15□□□□□ -1.1
ATP7AQ04656 AC078899.1-201ENST00000521432 1185 ntBASIC8.15□□□□□ -1.1
ATP7AQ04656 AP002373.2-201ENST00000541631 1060 ntBASIC8.15□□□□□ -1.1
ATP7AQ04656 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC8.15□□□□□ -1.1
ATP7AQ04656 AC018552.1-201ENST00000562099 811 ntBASIC8.15□□□□□ -1.1
ATP7AQ04656 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ATP7AQ04656 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC8.15□□□□□ -1.1
ATP7AQ04656 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ATP7AQ04656 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC8.15□□□□□ -1.1
ATP7AQ04656 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC8.15□□□□□ -1.1
ATP7AQ04656 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ATP7AQ04656 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
ATP7AQ04656 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ATP7AQ04656 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
ATP7AQ04656 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
ATP7AQ04656 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
ATP7AQ04656 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
ATP7AQ04656 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
ATP7AQ04656 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.11
ATP7AQ04656 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
ATP7AQ04656 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
ATP7AQ04656 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ATP7AQ04656 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ATP7AQ04656 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC8.14□□□□□ -1.11
ATP7AQ04656 RHOT1P3-201ENST00000436571 331 ntBASIC8.14□□□□□ -1.11
ATP7AQ04656 AL451063.1-201ENST00000450164 1133 ntBASIC8.14□□□□□ -1.11
ATP7AQ04656 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC8.14□□□□□ -1.11
ATP7AQ04656 AC002075.1-201ENST00000457396 676 ntBASIC8.14□□□□□ -1.11
ATP7AQ04656 AC004980.4-201ENST00000513375 203 ntBASIC8.14□□□□□ -1.11
ATP7AQ04656 SCARNA16.4-201ENST00000516956 187 ntBASIC8.14□□□□□ -1.11
ATP7AQ04656 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
ATP7AQ04656 AL353662.3-201ENST00000625131 237 ntBASIC8.14□□□□□ -1.11
ATP7AQ04656 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ATP7AQ04656 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ATP7AQ04656 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
ATP7AQ04656 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
ATP7AQ04656 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ATP7AQ04656 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ATP7AQ04656 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ATP7AQ04656 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ATP7AQ04656 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ATP7AQ04656 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms