Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPS3AP61247 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPS3AP61247 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
RPS3AP61247 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
RPS3AP61247 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.73□□□□□ -1.49
RPS3AP61247 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPS3AP61247 AC011416.1-201ENST00000514947 1732 ntBASIC5.73□□□□□ -1.49
RPS3AP61247 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
RPS3AP61247 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
RPS3AP61247 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
RPS3AP61247 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.73□□□□□ -1.49
RPS3AP61247 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RPS3AP61247 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RPS3AP61247 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
RPS3AP61247 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPS3AP61247 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.73□□□□□ -1.49
RPS3AP61247 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RPS3AP61247 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.72□□□□□ -1.49
RPS3AP61247 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPS3AP61247 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPS3AP61247 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RPS3AP61247 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.72□□□□□ -1.49
RPS3AP61247 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RPS3AP61247 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPS3AP61247 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.72□□□□□ -1.49
RPS3AP61247 HSPA8P14-201ENST00000552265 1805 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RPS3AP61247 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPS3AP61247 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RPS3AP61247 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPS3AP61247 Y_RNA.110-201ENST00000363220 99 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 RNA5SP232-201ENST00000364144 119 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.72□□□□□ -1.49
RPS3AP61247 MIR188-201ENST00000385034 86 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 AL356057.1-202ENST00000402263 756 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 AL139805.1-201ENST00000407837 289 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 UBE2V1P14-201ENST00000415815 558 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RPS3AP61247 RPS26P13-201ENST00000419030 330 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 AC074367.1-201ENST00000438685 1125 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 ARMC4P1-201ENST00000438905 707 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.72□□□□□ -1.49
RPS3AP61247 AL645936.1-201ENST00000441979 518 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 CXCR2P1-202ENST00000443392 1074 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 RN7SL369P-201ENST00000477138 299 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
RPS3AP61247 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.72□□□□□ -1.49
RPS3AP61247 ST13P12-201ENST00000508958 1094 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.72□□□□□ -1.49
RPS3AP61247 AC022826.1-201ENST00000519383 805 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.72□□□□□ -1.49
RPS3AP61247 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.72□□□□□ -1.49
RPS3AP61247 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.72□□□□□ -1.49
RPS3AP61247 AC005632.2-201ENST00000564271 828 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 LINC00556-201ENST00000569603 412 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.72□□□□□ -1.49
RPS3AP61247 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.72□□□□□ -1.49
RPS3AP61247 AL096803.3-201ENST00000609032 532 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.72□□□□□ -1.49
RPS3AP61247 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.72□□□□□ -1.49
RPS3AP61247 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPS3AP61247 AC004656.1-201ENST00000568479 4951 ntBASIC5.72□□□□□ -1.49
RPS3AP61247 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RPS3AP61247 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPS3AP61247 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RPS3AP61247 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
RPS3AP61247 SPATA2P1-201ENST00000431223 2055 ntBASIC5.71□□□□□ -1.49
RPS3AP61247 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RPS3AP61247 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RPS3AP61247 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RPS3AP61247 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.71□□□□□ -1.49
RPS3AP61247 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPS3AP61247 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RPS3AP61247 AL136984.1-201ENST00000607611 1893 ntBASIC5.71□□□□□ -1.5
RPS3AP61247 AC068870.3-201ENST00000625077 2536 ntBASIC5.71□□□□□ -1.5
RPS3AP61247 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPS3AP61247 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RPS3AP61247 AC068446.1-201ENST00000556425 1549 ntBASIC5.71□□□□□ -1.5
RPS3AP61247 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.71□□□□□ -1.5
RPS3AP61247 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RPS3AP61247 RNA5SP478-201ENST00000364657 115 ntBASIC5.71□□□□□ -1.5
RPS3AP61247 RBBP4P5-201ENST00000398583 1266 ntBASIC5.71□□□□□ -1.5
RPS3AP61247 Z86062.1-201ENST00000406773 777 ntBASIC5.71□□□□□ -1.5
RPS3AP61247 DHFRP2-201ENST00000414224 547 ntBASIC5.71□□□□□ -1.5
RPS3AP61247 AL158827.1-201ENST00000416300 391 ntBASIC5.71□□□□□ -1.5
RPS3AP61247 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.71□□□□□ -1.5
RPS3AP61247 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.71□□□□□ -1.5
RPS3AP61247 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.71□□□□□ -1.5
RPS3AP61247 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.71□□□□□ -1.5
RPS3AP61247 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RPS3AP61247 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.71□□□□□ -1.5
RPS3AP61247 KRT8P51-201ENST00000438938 274 ntBASIC5.71□□□□□ -1.5
RPS3AP61247 AL663074.2-201ENST00000440621 479 ntBASIC5.71□□□□□ -1.5
RPS3AP61247 AC007000.2-201ENST00000442564 487 ntBASIC5.71□□□□□ -1.5
RPS3AP61247 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.71□□□□□ -1.5
RPS3AP61247 OR13K1P-201ENST00000444577 975 ntBASIC5.71□□□□□ -1.5
RPS3AP61247 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.71□□□□□ -1.5
RPS3AP61247 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.71□□□□□ -1.5
RPS3AP61247 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms