Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AL390726.5-202ENST00000564800 256 ntBASIC7.85□□□□□ -1.15
CLTCL1P53675 AC133644.2-201ENST00000608142 540 ntBASIC7.85□□□□□ -1.15
CLTCL1P53675 MIR6748-201ENST00000610433 71 ntBASIC7.85□□□□□ -1.15
CLTCL1P53675 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CLTCL1P53675 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.85□□□□□ -1.15
CLTCL1P53675 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CLTCL1P53675 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.85□□□□□ -1.15
CLTCL1P53675 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.85□□□□□ -1.15
CLTCL1P53675 AC068870.1-201ENST00000563737 2455 ntBASIC7.85□□□□□ -1.15
CLTCL1P53675 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.85□□□□□ -1.15
CLTCL1P53675 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CLTCL1P53675 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CLTCL1P53675 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.85□□□□□ -1.15
CLTCL1P53675 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.85□□□□□ -1.15
CLTCL1P53675 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CLTCL1P53675 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
CLTCL1P53675 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
CLTCL1P53675 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CLTCL1P53675 RPL23AP17-201ENST00000401064 499 ntBASIC7.85□□□□□ -1.15
CLTCL1P53675 RNU4-64P-201ENST00000410795 131 ntBASIC7.85□□□□□ -1.15
CLTCL1P53675 RPS26P38-201ENST00000414476 348 ntBASIC7.85□□□□□ -1.15
CLTCL1P53675 AL590762.4-201ENST00000425885 253 ntBASIC7.85□□□□□ -1.15
CLTCL1P53675 RHOT1P3-201ENST00000436571 331 ntBASIC7.85□□□□□ -1.15
CLTCL1P53675 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.85□□□□□ -1.15
CLTCL1P53675 AL390879.1-201ENST00000439143 386 ntBASIC7.85□□□□□ -1.15
CLTCL1P53675 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC7.85□□□□□ -1.15
CLTCL1P53675 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.85□□□□□ -1.15
CLTCL1P53675 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.85□□□□□ -1.15
CLTCL1P53675 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC7.85□□□□□ -1.15
CLTCL1P53675 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC7.85□□□□□ -1.15
CLTCL1P53675 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.85□□□□□ -1.15
CLTCL1P53675 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CLTCL1P53675 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.85□□□□□ -1.15
CLTCL1P53675 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CLTCL1P53675 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CLTCL1P53675 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CLTCL1P53675 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CLTCL1P53675 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CLTCL1P53675 AL353796.1-201ENST00000561542 3241 ntBASIC7.84□□□□□ -1.15
CLTCL1P53675 ZNF969P-201ENST00000510345 2341 ntBASIC7.84□□□□□ -1.15
CLTCL1P53675 AC114947.2-201ENST00000565748 2125 ntBASIC7.84□□□□□ -1.15
CLTCL1P53675 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CLTCL1P53675 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CLTCL1P53675 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.84□□□□□ -1.15
CLTCL1P53675 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CLTCL1P53675 SNORA17.1-201ENST00000362945 126 ntBASIC7.84□□□□□ -1.15
CLTCL1P53675 AL133270.1-201ENST00000402635 279 ntBASIC7.84□□□□□ -1.15
CLTCL1P53675 RNU6ATAC7P-201ENST00000408111 127 ntBASIC7.84□□□□□ -1.15
CLTCL1P53675 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.84□□□□□ -1.15
CLTCL1P53675 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.84□□□□□ -1.15
CLTCL1P53675 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC7.84□□□□□ -1.15
CLTCL1P53675 RPS18P6-201ENST00000476880 458 ntBASIC7.84□□□□□ -1.15
CLTCL1P53675 AC013701.1-201ENST00000522657 465 ntBASIC7.84□□□□□ -1.15
CLTCL1P53675 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.84□□□□□ -1.15
CLTCL1P53675 AP004607.2-201ENST00000533949 322 ntBASIC7.84□□□□□ -1.15
CLTCL1P53675 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.84□□□□□ -1.15
CLTCL1P53675 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.84□□□□□ -1.15
CLTCL1P53675 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC7.84□□□□□ -1.15
CLTCL1P53675 SETP3-201ENST00000581726 813 ntBASIC7.84□□□□□ -1.15
CLTCL1P53675 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.84□□□□□ -1.15
CLTCL1P53675 AL049539.1-201ENST00000611964 459 ntBASIC7.84□□□□□ -1.15
CLTCL1P53675 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.84□□□□□ -1.15
CLTCL1P53675 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CLTCL1P53675 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CLTCL1P53675 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CLTCL1P53675 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CLTCL1P53675 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CLTCL1P53675 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CLTCL1P53675 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.84□□□□□ -1.16
CLTCL1P53675 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CLTCL1P53675 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC7.83□□□□□ -1.16
CLTCL1P53675 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CLTCL1P53675 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CLTCL1P53675 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
CLTCL1P53675 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.83□□□□□ -1.16
CLTCL1P53675 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CLTCL1P53675 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC7.83□□□□□ -1.16
CLTCL1P53675 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CLTCL1P53675 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CLTCL1P53675 RNGTTP1-201ENST00000420965 728 ntBASIC7.83□□□□□ -1.16
CLTCL1P53675 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC7.83□□□□□ -1.16
CLTCL1P53675 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CLTCL1P53675 PDCL3P4-201ENST00000489621 720 ntBASIC7.83□□□□□ -1.16
CLTCL1P53675 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.83□□□□□ -1.16
CLTCL1P53675 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.83□□□□□ -1.16
CLTCL1P53675 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC7.83□□□□□ -1.16
CLTCL1P53675 WBP1LP8-201ENST00000617401 327 ntBASIC7.83□□□□□ -1.16
CLTCL1P53675 AC087385.3-201ENST00000620477 187 ntBASIC7.83□□□□□ -1.16
CLTCL1P53675 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.83□□□□□ -1.16
CLTCL1P53675 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
CLTCL1P53675 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CLTCL1P53675 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CLTCL1P53675 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CLTCL1P53675 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC7.83□□□□□ -1.16
CLTCL1P53675 AC112255.1-201ENST00000624070 2493 ntBASIC7.83□□□□□ -1.16
CLTCL1P53675 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CLTCL1P53675 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CLTCL1P53675 TTC3P1-201ENST00000399586 6081 ntBASIC7.83□□□□□ -1.16
CLTCL1P53675 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CLTCL1P53675 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms