Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MTND5P8-201ENST00000449817 1083 ntBASIC7.18□□□□□ -1.26
MRE11P49959 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.18□□□□□ -1.26
MRE11P49959 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
MRE11P49959 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.18□□□□□ -1.26
MRE11P49959 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
MRE11P49959 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.18□□□□□ -1.26
MRE11P49959 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
MRE11P49959 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.18□□□□□ -1.26
MRE11P49959 AC027544.3-201ENST00000535082 757 ntBASIC7.18□□□□□ -1.26
MRE11P49959 VBP1-203ENST00000535916 944 ntTSL 2 BASIC7.18□□□□□ -1.26
MRE11P49959 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.18□□□□□ -1.26
MRE11P49959 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.18□□□□□ -1.26
MRE11P49959 AL049779.3-201ENST00000557141 606 ntBASIC7.18□□□□□ -1.26
MRE11P49959 AC010547.6-201ENST00000571789 193 ntBASIC7.18□□□□□ -1.26
MRE11P49959 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.18□□□□□ -1.26
MRE11P49959 AC015911.5-201ENST00000587076 451 ntBASIC7.18□□□□□ -1.26
MRE11P49959 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.18□□□□□ -1.26
MRE11P49959 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC7.18□□□□□ -1.26
MRE11P49959 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
MRE11P49959 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
MRE11P49959 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.18□□□□□ -1.26
MRE11P49959 MIR6719-201ENST00000622428 87 ntBASIC7.18□□□□□ -1.26
MRE11P49959 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC7.18□□□□□ -1.26
MRE11P49959 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.18□□□□□ -1.26
MRE11P49959 CU459211.1-201ENST00000635667 749 ntBASIC7.18□□□□□ -1.26
MRE11P49959 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
MRE11P49959 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.18□□□□□ -1.26
MRE11P49959 AC137056.2-201ENST00000624055 1958 ntBASIC7.18□□□□□ -1.26
MRE11P49959 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC7.18□□□□□ -1.26
MRE11P49959 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC7.18□□□□□ -1.26
MRE11P49959 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
MRE11P49959 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.18□□□□□ -1.26
MRE11P49959 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.18□□□□□ -1.26
MRE11P49959 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
MRE11P49959 AC114774.1-201ENST00000507410 1770 ntBASIC7.18□□□□□ -1.26
MRE11P49959 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
MRE11P49959 AP005435.3-201ENST00000531260 3198 ntBASIC7.17□□□□□ -1.26
MRE11P49959 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
MRE11P49959 AC090220.1-201ENST00000593078 1699 ntBASIC7.17□□□□□ -1.26
MRE11P49959 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
MRE11P49959 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
MRE11P49959 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
MRE11P49959 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC7.17□□□□□ -1.26
MRE11P49959 RN7SKP130-201ENST00000364924 301 ntBASIC7.17□□□□□ -1.26
MRE11P49959 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
MRE11P49959 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
MRE11P49959 MIR433-201ENST00000384837 93 ntBASIC7.17□□□□□ -1.26
MRE11P49959 MIR122-201ENST00000385044 85 ntBASIC7.17□□□□□ -1.26
MRE11P49959 RNU6-316P-201ENST00000391027 107 ntBASIC7.17□□□□□ -1.26
MRE11P49959 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
MRE11P49959 RN7SKP286-201ENST00000410894 299 ntBASIC7.17□□□□□ -1.26
MRE11P49959 HMGN1P20-201ENST00000411849 300 ntBASIC7.17□□□□□ -1.26
MRE11P49959 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.17□□□□□ -1.26
MRE11P49959 AL590128.1-201ENST00000433407 286 ntBASIC7.17□□□□□ -1.26
MRE11P49959 AMYP1-201ENST00000440059 1023 ntBASIC7.17□□□□□ -1.26
MRE11P49959 CLIC4P1-201ENST00000453177 535 ntBASIC7.17□□□□□ -1.26
MRE11P49959 AC112187.1-201ENST00000455837 479 ntBASIC7.17□□□□□ -1.26
MRE11P49959 DEFB109A-201ENST00000482450 265 ntBASIC7.17□□□□□ -1.26
MRE11P49959 AC096571.1-202ENST00000506634 735 ntBASIC7.17□□□□□ -1.26
MRE11P49959 AC106800.3-201ENST00000511389 308 ntBASIC7.17□□□□□ -1.26
MRE11P49959 SNORA70.11-201ENST00000515987 138 ntBASIC7.17□□□□□ -1.26
MRE11P49959 SNORA70.13-201ENST00000516116 138 ntBASIC7.17□□□□□ -1.26
MRE11P49959 RNA5SP400-201ENST00000517155 111 ntBASIC7.17□□□□□ -1.26
MRE11P49959 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.17□□□□□ -1.26
MRE11P49959 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.17□□□□□ -1.26
MRE11P49959 AC019322.1-201ENST00000571869 389 ntBASIC7.17□□□□□ -1.26
MRE11P49959 AL078601.3-201ENST00000573303 535 ntBASIC7.17□□□□□ -1.26
MRE11P49959 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC7.17□□□□□ -1.26
MRE11P49959 MIR132-201ENST00000591554 101 ntBASIC7.17□□□□□ -1.26
MRE11P49959 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.17□□□□□ -1.26
MRE11P49959 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.17□□□□□ -1.26
MRE11P49959 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.17□□□□□ -1.26
MRE11P49959 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.17□□□□□ -1.26
MRE11P49959 MIR6748-201ENST00000610433 71 ntBASIC7.17□□□□□ -1.26
MRE11P49959 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.17□□□□□ -1.26
MRE11P49959 AC120349.3-201ENST00000624377 529 ntBASIC7.17□□□□□ -1.26
MRE11P49959 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.17□□□□□ -1.26
MRE11P49959 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.17□□□□□ -1.26
MRE11P49959 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
MRE11P49959 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
MRE11P49959 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
MRE11P49959 HDAC1P2-201ENST00000453661 1398 ntBASIC7.17□□□□□ -1.26
MRE11P49959 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC7.17□□□□□ -1.26
MRE11P49959 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
MRE11P49959 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
MRE11P49959 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
MRE11P49959 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
MRE11P49959 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.16□□□□□ -1.26
MRE11P49959 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
MRE11P49959 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
MRE11P49959 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC7.16□□□□□ -1.26
MRE11P49959 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC7.16□□□□□ -1.26
MRE11P49959 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
MRE11P49959 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.16□□□□□ -1.26
MRE11P49959 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
MRE11P49959 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
MRE11P49959 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
MRE11P49959 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
MRE11P49959 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.16□□□□□ -1.26
MRE11P49959 SNORA5.1-201ENST00000384275 131 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms