Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RFC3P40938 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFC3P40938 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFC3P40938 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RFC3P40938 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.36□□□□□ -1.55
RFC3P40938 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RFC3P40938 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFC3P40938 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RFC3P40938 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFC3P40938 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFC3P40938 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFC3P40938 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RFC3P40938 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFC3P40938 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.35□□□□□ -1.55
RFC3P40938 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.35□□□□□ -1.55
RFC3P40938 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.35□□□□□ -1.55
RFC3P40938 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFC3P40938 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RFC3P40938 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFC3P40938 AL353763.1-201ENST00000624467 1628 ntBASIC5.35□□□□□ -1.55
RFC3P40938 RN7SKP151-201ENST00000410230 316 ntBASIC5.35□□□□□ -1.55
RFC3P40938 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFC3P40938 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.35□□□□□ -1.55
RFC3P40938 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.35□□□□□ -1.55
RFC3P40938 HMGB3P24-201ENST00000433260 622 ntBASIC5.35□□□□□ -1.55
RFC3P40938 RPS12P17-201ENST00000438591 377 ntBASIC5.35□□□□□ -1.55
RFC3P40938 AL390879.1-201ENST00000439143 386 ntBASIC5.35□□□□□ -1.55
RFC3P40938 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.35□□□□□ -1.55
RFC3P40938 EEF1B2P6-201ENST00000445713 673 ntBASIC5.35□□□□□ -1.55
RFC3P40938 RPSAP39-201ENST00000467439 883 ntBASIC5.35□□□□□ -1.55
RFC3P40938 RPL23AP40-201ENST00000487630 390 ntBASIC5.35□□□□□ -1.55
RFC3P40938 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.35□□□□□ -1.55
RFC3P40938 RNA5SP362-201ENST00000516048 118 ntBASIC5.35□□□□□ -1.55
RFC3P40938 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.35□□□□□ -1.55
RFC3P40938 AC136777.2-201ENST00000522979 358 ntBASIC5.35□□□□□ -1.55
RFC3P40938 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.35□□□□□ -1.55
RFC3P40938 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.35□□□□□ -1.55
RFC3P40938 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFC3P40938 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.35□□□□□ -1.55
RFC3P40938 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFC3P40938 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.35□□□□□ -1.55
RFC3P40938 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.35□□□□□ -1.55
RFC3P40938 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.35□□□□□ -1.55
RFC3P40938 AC109309.2-201ENST00000612597 332 ntBASIC5.35□□□□□ -1.55
RFC3P40938 RNA5SP440-201ENST00000612665 119 ntBASIC5.35□□□□□ -1.55
RFC3P40938 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.35□□□□□ -1.55
RFC3P40938 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.35□□□□□ -1.55
RFC3P40938 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RFC3P40938 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFC3P40938 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFC3P40938 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFC3P40938 AC006484.1-201ENST00000435086 1884 ntBASIC5.34□□□□□ -1.55
RFC3P40938 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
RFC3P40938 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.34□□□□□ -1.55
RFC3P40938 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.34□□□□□ -1.55
RFC3P40938 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFC3P40938 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFC3P40938 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFC3P40938 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFC3P40938 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFC3P40938 RNA5SP394-201ENST00000364216 119 ntBASIC5.34□□□□□ -1.55
RFC3P40938 TRAV35-201ENST00000390462 330 ntBASIC5.34□□□□□ -1.55
RFC3P40938 ADAM24P-201ENST00000398655 2101 ntBASIC5.34□□□□□ -1.55
RFC3P40938 OR7E101P-201ENST00000400428 513 ntBASIC5.34□□□□□ -1.55
RFC3P40938 AL663074.2-201ENST00000440621 479 ntBASIC5.34□□□□□ -1.55
RFC3P40938 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.34□□□□□ -1.55
RFC3P40938 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.34□□□□□ -1.55
RFC3P40938 AC110749.1-201ENST00000462007 357 ntBASIC5.34□□□□□ -1.55
RFC3P40938 AC074386.1-201ENST00000476560 767 ntBASIC5.34□□□□□ -1.55
RFC3P40938 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.34□□□□□ -1.55
RFC3P40938 RN7SKP288-201ENST00000516227 268 ntBASIC5.34□□□□□ -1.55
RFC3P40938 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.34□□□□□ -1.55
RFC3P40938 HMGN2P36-201ENST00000529541 409 ntBASIC5.34□□□□□ -1.55
RFC3P40938 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.34□□□□□ -1.55
RFC3P40938 AC125612.1-201ENST00000547580 377 ntBASIC5.34□□□□□ -1.55
RFC3P40938 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.34□□□□□ -1.55
RFC3P40938 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.34□□□□□ -1.55
RFC3P40938 AP001496.3-201ENST00000580230 913 ntBASIC5.34□□□□□ -1.55
RFC3P40938 AP001357.1-201ENST00000586304 1053 ntBASIC5.34□□□□□ -1.55
RFC3P40938 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.34□□□□□ -1.55
RFC3P40938 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.34□□□□□ -1.55
RFC3P40938 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.34□□□□□ -1.55
RFC3P40938 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.34□□□□□ -1.55
RFC3P40938 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFC3P40938 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.34□□□□□ -1.55
RFC3P40938 AL139099.4-201ENST00000614802 114 ntBASIC5.34□□□□□ -1.55
RFC3P40938 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.34□□□□□ -1.55
RFC3P40938 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.34□□□□□ -1.55
RFC3P40938 AC087565.3-203ENST00000641018 837 ntBASIC5.34□□□□□ -1.55
RFC3P40938 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RFC3P40938 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
RFC3P40938 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFC3P40938 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms