Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 CBX3P2-202ENST00000583365 535 ntBASIC5.69□□□□□ -1.5
ABCD3P28288 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.69□□□□□ -1.5
ABCD3P28288 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.69□□□□□ -1.5
ABCD3P28288 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.69□□□□□ -1.5
ABCD3P28288 FAM27E2-201ENST00000619668 403 ntBASIC5.69□□□□□ -1.5
ABCD3P28288 AL137067.2-201ENST00000621202 131 ntBASIC5.69□□□□□ -1.5
ABCD3P28288 AP001052.1-201ENST00000626421 99 ntBASIC5.69□□□□□ -1.5
ABCD3P28288 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
ABCD3P28288 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ABCD3P28288 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ABCD3P28288 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ABCD3P28288 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.69□□□□□ -1.5
ABCD3P28288 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ABCD3P28288 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ABCD3P28288 CCNT2P1-201ENST00000423082 1315 ntBASIC5.69□□□□□ -1.5
ABCD3P28288 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ABCD3P28288 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ABCD3P28288 AC024587.1-201ENST00000505925 2157 ntBASIC5.69□□□□□ -1.5
ABCD3P28288 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ABCD3P28288 SHQ1P1-201ENST00000437111 1544 ntBASIC5.69□□□□□ -1.5
ABCD3P28288 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ABCD3P28288 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
ABCD3P28288 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.68□□□□□ -1.5
ABCD3P28288 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ABCD3P28288 AL359091.1-201ENST00000449048 1734 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ABCD3P28288 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.68□□□□□ -1.5
ABCD3P28288 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ABCD3P28288 AC123769.1-201ENST00000530992 3192 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.68□□□□□ -1.5
ABCD3P28288 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
ABCD3P28288 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ABCD3P28288 SNORA21-201ENST00000362423 132 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 RNA5SP110-201ENST00000362638 115 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 RNU6-650P-201ENST00000365658 111 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ABCD3P28288 CHMP1B2P-201ENST00000399581 597 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 RPL5P19-201ENST00000404228 893 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 RNA5SP156-201ENST00000410250 110 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 RNU2-18P-201ENST00000411224 162 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.68□□□□□ -1.5
ABCD3P28288 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.68□□□□□ -1.5
ABCD3P28288 RPS7P8-201ENST00000418311 581 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.68□□□□□ -1.5
ABCD3P28288 OR6K4P-201ENST00000423179 955 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.68□□□□□ -1.5
ABCD3P28288 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ABCD3P28288 RPL23AP23-201ENST00000452590 471 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 AC002553.3-201ENST00000453002 341 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.68□□□□□ -1.5
ABCD3P28288 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.68□□□□□ -1.5
ABCD3P28288 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.68□□□□□ -1.5
ABCD3P28288 AC093815.1-201ENST00000508637 280 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 RNA5SP434-201ENST00000516647 121 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 IGKV2-19-201ENST00000518132 283 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 OR6M2P-201ENST00000529831 871 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.68□□□□□ -1.5
ABCD3P28288 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.68□□□□□ -1.5
ABCD3P28288 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.68□□□□□ -1.5
ABCD3P28288 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ABCD3P28288 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.68□□□□□ -1.5
ABCD3P28288 AC093510.2-201ENST00000562820 896 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 AC122134.1-201ENST00000565664 1104 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 GLYATL1P2-202ENST00000588046 902 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.68□□□□□ -1.5
ABCD3P28288 AC016542.1-201ENST00000608259 493 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 RFPL4AP6-201ENST00000616792 846 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 AC073592.6-201ENST00000624271 415 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 AL138960.2-201ENST00000625145 535 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 OR8A1-204ENST00000642111 1145 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 AP005432.1-201ENST00000580891 3485 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ABCD3P28288 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.68□□□□□ -1.5
ABCD3P28288 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ABCD3P28288 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
ABCD3P28288 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
ABCD3P28288 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ABCD3P28288 AC097461.1-201ENST00000568928 2821 ntBASIC5.68□□□□□ -1.5
ABCD3P28288 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ABCD3P28288 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ABCD3P28288 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ABCD3P28288 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ABCD3P28288 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ABCD3P28288 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.67□□□□□ -1.5
ABCD3P28288 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.67□□□□□ -1.5
ABCD3P28288 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.67□□□□□ -1.5
ABCD3P28288 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ABCD3P28288 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ABCD3P28288 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
ABCD3P28288 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ABCD3P28288 AL359715.4-201ENST00000606629 1436 ntBASIC5.67□□□□□ -1.5
ABCD3P28288 AC079753.1-201ENST00000623243 3868 ntBASIC5.67□□□□□ -1.5
ABCD3P28288 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.67□□□□□ -1.5
ABCD3P28288 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.67□□□□□ -1.5
ABCD3P28288 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.67□□□□□ -1.5
ABCD3P28288 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ABCD3P28288 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ABCD3P28288 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.67□□□□□ -1.5
ABCD3P28288 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.67□□□□□ -1.5
ABCD3P28288 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms