Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.84□□□□□ -1.15
LMNB1P20700 AC090425.2-201ENST00000608818 501 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.84□□□□□ -1.15
LMNB1P20700 AC105105.5-201ENST00000622635 1294 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.84□□□□□ -1.15
LMNB1P20700 AC083865.1-201ENST00000636634 831 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
LMNB1P20700 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 AP000641.1-201ENST00000531988 1639 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.84□□□□□ -1.15
LMNB1P20700 AC099786.3-201ENST00000565735 1410 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 AC073429.2-201ENST00000569694 1444 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 AC006600.2-201ENST00000624834 2506 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
LMNB1P20700 MTND4P5-201ENST00000435821 1374 ntBASIC7.84□□□□□ -1.16
LMNB1P20700 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
LMNB1P20700 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
LMNB1P20700 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
LMNB1P20700 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
LMNB1P20700 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.83□□□□□ -1.16
LMNB1P20700 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.83□□□□□ -1.16
LMNB1P20700 CUL4AP1-201ENST00000514750 1863 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 AC079949.2-201ENST00000617117 2933 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.83□□□□□ -1.16
LMNB1P20700 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.83□□□□□ -1.16
LMNB1P20700 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.83□□□□□ -1.16
LMNB1P20700 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.83□□□□□ -1.16
LMNB1P20700 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
LMNB1P20700 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
LMNB1P20700 MIR365B-201ENST00000362317 111 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 RNA5SP65-201ENST00000363166 119 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 SDHDP6-201ENST00000414693 480 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 AL158825.1-201ENST00000414735 521 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.83□□□□□ -1.16
LMNB1P20700 AL606490.7-201ENST00000433136 191 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.83□□□□□ -1.16
LMNB1P20700 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.83□□□□□ -1.16
LMNB1P20700 AC016908.1-201ENST00000442571 1219 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 AP000281.1-201ENST00000444036 316 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC7.83□□□□□ -1.16
LMNB1P20700 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
LMNB1P20700 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.83□□□□□ -1.16
LMNB1P20700 AC022336.1-201ENST00000475510 337 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 AC112225.1-201ENST00000508230 297 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 AC093752.1-206ENST00000511823 336 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 IGLV2-28-201ENST00000520681 304 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 AC087373.1-201ENST00000524920 491 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.83□□□□□ -1.16
LMNB1P20700 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.83□□□□□ -1.16
LMNB1P20700 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.83□□□□□ -1.16
LMNB1P20700 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.83□□□□□ -1.16
LMNB1P20700 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.83□□□□□ -1.16
LMNB1P20700 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.83□□□□□ -1.16
LMNB1P20700 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.83□□□□□ -1.16
LMNB1P20700 DHFRP1-201ENST00000579682 559 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 AC005244.1-201ENST00000582566 339 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.83□□□□□ -1.16
LMNB1P20700 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.83□□□□□ -1.16
LMNB1P20700 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
LMNB1P20700 AC090236.2-201ENST00000587933 1101 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 AC073387.2-201ENST00000604797 784 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.83□□□□□ -1.16
LMNB1P20700 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 AC026585.1-201ENST00000619582 524 ntBASIC7.83□□□□□ -1.16
LMNB1P20700 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.83□□□□□ -1.16
LMNB1P20700 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.83□□□□□ -1.16
LMNB1P20700 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.83□□□□□ -1.16
LMNB1P20700 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.83□□□□□ -1.16
LMNB1P20700 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
LMNB1P20700 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
LMNB1P20700 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
LMNB1P20700 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LMNB1P20700 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
LMNB1P20700 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LMNB1P20700 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
LMNB1P20700 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms