Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
NFKB1P19838 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NFKB1P19838 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NFKB1P19838 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
NFKB1P19838 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.36□□□□□ -1.23
NFKB1P19838 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.36□□□□□ -1.23
NFKB1P19838 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.36□□□□□ -1.23
NFKB1P19838 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.36□□□□□ -1.23
NFKB1P19838 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.36□□□□□ -1.23
NFKB1P19838 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NFKB1P19838 AP002364.1-201ENST00000623330 3386 ntBASIC7.36□□□□□ -1.23
NFKB1P19838 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 AC061975.5-201ENST00000584928 1441 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.35□□□□□ -1.23
NFKB1P19838 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.35□□□□□ -1.23
NFKB1P19838 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
NFKB1P19838 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
NFKB1P19838 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.35□□□□□ -1.23
NFKB1P19838 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
NFKB1P19838 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.35□□□□□ -1.23
NFKB1P19838 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
NFKB1P19838 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.35□□□□□ -1.23
NFKB1P19838 RNU6-1055P-201ENST00000391085 107 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 SUMO2P13-201ENST00000403109 272 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.35□□□□□ -1.23
NFKB1P19838 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC7.35□□□□□ -1.23
NFKB1P19838 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.35□□□□□ -1.23
NFKB1P19838 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.35□□□□□ -1.23
NFKB1P19838 USP9YP20-201ENST00000419224 558 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC7.35□□□□□ -1.23
NFKB1P19838 RNGTTP1-201ENST00000420965 728 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 RBM22P7-201ENST00000421321 280 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 GTF2IP23-201ENST00000423746 351 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 PPIL1P1-201ENST00000423936 499 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC7.35□□□□□ -1.23
NFKB1P19838 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.35□□□□□ -1.23
NFKB1P19838 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.35□□□□□ -1.23
NFKB1P19838 AC016908.1-201ENST00000442571 1219 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC7.35□□□□□ -1.23
NFKB1P19838 FAR2P1-206ENST00000449736 709 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.35□□□□□ -1.23
NFKB1P19838 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.35□□□□□ -1.23
NFKB1P19838 PGBD4P1-201ENST00000473644 407 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 RN7SL182P-201ENST00000496499 300 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.35□□□□□ -1.23
NFKB1P19838 RNU6-314P-201ENST00000516574 104 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.35□□□□□ -1.23
NFKB1P19838 AC018523.1-201ENST00000534211 512 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.35□□□□□ -1.23
NFKB1P19838 AL121839.1-201ENST00000556233 1185 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.35□□□□□ -1.23
NFKB1P19838 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC7.35□□□□□ -1.23
NFKB1P19838 AC096708.2-201ENST00000577676 512 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 MIR5705-201ENST00000579870 89 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.35□□□□□ -1.23
NFKB1P19838 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC7.35□□□□□ -1.23
NFKB1P19838 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NFKB1P19838 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC7.35□□□□□ -1.23
NFKB1P19838 AC015871.2-201ENST00000603605 948 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 AC104117.5-201ENST00000606195 547 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 RN7SL778P-201ENST00000607160 297 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 AC106028.5-201ENST00000610332 395 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 AL359697.1-201ENST00000624879 587 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.35□□□□□ -1.23
NFKB1P19838 AC087821.2-201ENST00000637086 450 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 AL034408.1-201ENST00000637712 664 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
NFKB1P19838 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
NFKB1P19838 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
NFKB1P19838 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.35□□□□□ -1.23
NFKB1P19838 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
NFKB1P19838 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.35□□□□□ -1.23
NFKB1P19838 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.35□□□□□ -1.23
NFKB1P19838 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.35□□□□□ -1.23
NFKB1P19838 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.35□□□□□ -1.23
NFKB1P19838 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
NFKB1P19838 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NFKB1P19838 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.34□□□□□ -1.23
NFKB1P19838 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms