Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC131159.1-201ENST00000621854 213 ntBASIC7.81□□□□□ -1.16
ERCC3P19447 AC073593.1-201ENST00000624500 411 ntBASIC7.81□□□□□ -1.16
ERCC3P19447 SNORA16A-202ENST00000628458 135 ntBASIC7.81□□□□□ -1.16
ERCC3P19447 AL121936.2-201ENST00000641935 662 ntBASIC7.81□□□□□ -1.16
ERCC3P19447 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
ERCC3P19447 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
ERCC3P19447 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
ERCC3P19447 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
ERCC3P19447 AC005261.4-201ENST00000600047 1385 ntBASIC7.81□□□□□ -1.16
ERCC3P19447 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.81□□□□□ -1.16
ERCC3P19447 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
ERCC3P19447 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.81□□□□□ -1.16
ERCC3P19447 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
ERCC3P19447 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
ERCC3P19447 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
ERCC3P19447 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
ERCC3P19447 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
ERCC3P19447 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.8□□□□□ -1.16
ERCC3P19447 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.8□□□□□ -1.16
ERCC3P19447 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
ERCC3P19447 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.8□□□□□ -1.16
ERCC3P19447 SNORD35A-201ENST00000363389 86 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.8□□□□□ -1.16
ERCC3P19447 RN7SKP129-201ENST00000410288 299 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC7.8□□□□□ -1.16
ERCC3P19447 OR4K6P-201ENST00000416478 897 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.8□□□□□ -1.16
ERCC3P19447 AC009518.2-201ENST00000418056 731 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.8□□□□□ -1.16
ERCC3P19447 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC7.8□□□□□ -1.16
ERCC3P19447 GAPDHP57-201ENST00000424400 585 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.8□□□□□ -1.16
ERCC3P19447 YWHAEP5-201ENST00000431545 765 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 COL11A2P1-205ENST00000441798 676 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 AC005002.1-201ENST00000447458 540 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
ERCC3P19447 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.8□□□□□ -1.16
ERCC3P19447 RN7SL413P-201ENST00000482700 297 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
ERCC3P19447 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
ERCC3P19447 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.8□□□□□ -1.16
ERCC3P19447 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
ERCC3P19447 MTCO3P15-201ENST00000526563 574 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC7.8□□□□□ -1.16
ERCC3P19447 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC7.8□□□□□ -1.16
ERCC3P19447 AC135279.1-201ENST00000543493 504 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.8□□□□□ -1.16
ERCC3P19447 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
ERCC3P19447 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.8□□□□□ -1.16
ERCC3P19447 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.8□□□□□ -1.16
ERCC3P19447 OR1E3-201ENST00000575608 948 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 AC063977.7-201ENST00000594454 337 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 ZNF92P3-201ENST00000596594 954 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.8□□□□□ -1.16
ERCC3P19447 AC090525.3-201ENST00000605601 189 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 AC064807.4-201ENST00000607201 407 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 AC145207.9-201ENST00000623802 325 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC7.8□□□□□ -1.16
ERCC3P19447 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.8□□□□□ -1.16
ERCC3P19447 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
ERCC3P19447 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.8□□□□□ -1.16
ERCC3P19447 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
ERCC3P19447 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
ERCC3P19447 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
ERCC3P19447 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.8□□□□□ -1.16
ERCC3P19447 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
ERCC3P19447 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.8□□□□□ -1.16
ERCC3P19447 MT-RNR2-201ENST00000387347 1559 ntBASIC7.8□□□□□ -1.16
ERCC3P19447 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
ERCC3P19447 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
ERCC3P19447 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
ERCC3P19447 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.79□□□□□ -1.16
ERCC3P19447 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 NACA3P-201ENST00000359690 648 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 RNA5SP321-201ENST00000362722 111 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 RNU6-185P-201ENST00000384421 107 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 AL590084.1-201ENST00000407885 387 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.79□□□□□ -1.16
ERCC3P19447 OR6K4P-201ENST00000423179 955 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC7.79□□□□□ -1.16
ERCC3P19447 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.79□□□□□ -1.16
ERCC3P19447 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.79□□□□□ -1.16
ERCC3P19447 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.79□□□□□ -1.16
ERCC3P19447 MTCO1P52-201ENST00000433928 531 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 HMGN1P6-201ENST00000438508 291 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.79□□□□□ -1.16
ERCC3P19447 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC7.79□□□□□ -1.16
ERCC3P19447 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.79□□□□□ -1.16
ERCC3P19447 AURKAPS1-201ENST00000451805 1212 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms