Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LYPLA1P3-201ENST00000402650 695 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 RNU4-72P-201ENST00000410754 173 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.52□□□□□ -1.37
COL6A2P12110 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.52□□□□□ -1.37
COL6A2P12110 RPS7P9-201ENST00000414704 586 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.52□□□□□ -1.37
COL6A2P12110 SETP9-201ENST00000423837 832 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.52□□□□□ -1.37
COL6A2P12110 MTCO3P30-201ENST00000426425 670 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 USP9YP14-201ENST00000430663 563 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 PUDPP2-201ENST00000431423 643 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC6.52□□□□□ -1.37
COL6A2P12110 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.52□□□□□ -1.37
COL6A2P12110 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.52□□□□□ -1.37
COL6A2P12110 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.52□□□□□ -1.37
COL6A2P12110 NANOGP2-201ENST00000435391 727 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.52□□□□□ -1.37
COL6A2P12110 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.52□□□□□ -1.37
COL6A2P12110 PFN1P11-201ENST00000445829 389 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.52□□□□□ -1.37
COL6A2P12110 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 CCNJP2-201ENST00000457810 1163 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 RPL23AP64-201ENST00000469465 435 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 RPS16P9-201ENST00000477220 427 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 AC025271.1-201ENST00000485045 429 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.52□□□□□ -1.37
COL6A2P12110 AL390198.2-201ENST00000510553 222 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 RN7SKP248-201ENST00000516278 305 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 HMGB1P1-201ENST00000522557 636 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.52□□□□□ -1.37
COL6A2P12110 MTND2P26-201ENST00000528255 1029 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.52□□□□□ -1.37
COL6A2P12110 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.52□□□□□ -1.37
COL6A2P12110 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.52□□□□□ -1.37
COL6A2P12110 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.52□□□□□ -1.37
COL6A2P12110 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.52□□□□□ -1.37
COL6A2P12110 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.52□□□□□ -1.37
COL6A2P12110 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC6.52□□□□□ -1.37
COL6A2P12110 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 AC119751.7-201ENST00000600494 245 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 AC005377.1-201ENST00000605126 456 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 AC016877.3-201ENST00000606778 504 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.52□□□□□ -1.37
COL6A2P12110 VIS1.1-201ENST00000610517 203 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 AP001264.1-201ENST00000620602 703 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 AP000676.3-201ENST00000623299 569 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 AC018692.2-201ENST00000624130 348 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC6.52□□□□□ -1.37
COL6A2P12110 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.52□□□□□ -1.37
COL6A2P12110 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
COL6A2P12110 AL596275.2-207ENST00000641188 675 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.52□□□□□ -1.37
COL6A2P12110 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
COL6A2P12110 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.52□□□□□ -1.37
COL6A2P12110 NCOA4P2-201ENST00000340589 1813 ntBASIC6.52□□□□□ -1.37
COL6A2P12110 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL6A2P12110 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
COL6A2P12110 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.52□□□□□ -1.37
COL6A2P12110 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
COL6A2P12110 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.52□□□□□ -1.37
COL6A2P12110 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
COL6A2P12110 AC011455.2-201ENST00000599320 3336 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL6A2P12110 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL6A2P12110 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL6A2P12110 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.51□□□□□ -1.37
COL6A2P12110 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.51□□□□□ -1.37
COL6A2P12110 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.51□□□□□ -1.37
COL6A2P12110 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.51□□□□□ -1.37
COL6A2P12110 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.51□□□□□ -1.37
COL6A2P12110 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.51□□□□□ -1.37
COL6A2P12110 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL6A2P12110 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL6A2P12110 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL6A2P12110 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL6A2P12110 Y_RNA.436-201ENST00000384097 102 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL6A2P12110 RN7SKP137-201ENST00000411074 307 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 AL031779.1-201ENST00000415663 330 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 AL359092.1-201ENST00000417156 265 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 AC007568.1-201ENST00000422912 471 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.51□□□□□ -1.37
COL6A2P12110 AC009362.1-201ENST00000427253 406 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 OR6R1P-201ENST00000431838 940 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 AC005345.1-201ENST00000431868 217 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.51□□□□□ -1.37
COL6A2P12110 AC090018.1-201ENST00000434369 367 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 AC027124.1-201ENST00000440852 466 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms