Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AL122125.1-201ENST00000616999 600 ntBASIC6.33□□□□□ -1.4
TPM3P06753 FAM27E2-201ENST00000619668 403 ntBASIC6.33□□□□□ -1.4
TPM3P06753 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM3P06753 AC099654.6-201ENST00000636487 512 ntBASIC6.33□□□□□ -1.4
TPM3P06753 AC010325.3-201ENST00000641084 394 ntBASIC6.33□□□□□ -1.4
TPM3P06753 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TPM3P06753 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM3P06753 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
TPM3P06753 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TPM3P06753 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM3P06753 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
TPM3P06753 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM3P06753 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
TPM3P06753 CASC19-248ENST00000641674 1356 ntBASIC6.32□□□□□ -1.4
TPM3P06753 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 AC083843.2-201ENST00000568248 6253 ntBASIC6.32□□□□□ -1.4
TPM3P06753 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.32□□□□□ -1.4
TPM3P06753 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
TPM3P06753 KIF4CP-201ENST00000422742 1279 ntBASIC6.32□□□□□ -1.4
TPM3P06753 VN1R20P-201ENST00000425215 966 ntBASIC6.32□□□□□ -1.4
TPM3P06753 RPS19P6-201ENST00000441327 433 ntBASIC6.32□□□□□ -1.4
TPM3P06753 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.32□□□□□ -1.4
TPM3P06753 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.32□□□□□ -1.4
TPM3P06753 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 AL157777.1-201ENST00000468100 304 ntBASIC6.32□□□□□ -1.4
TPM3P06753 AP000797.2-201ENST00000475768 606 ntBASIC6.32□□□□□ -1.4
TPM3P06753 AC093325.1-201ENST00000508378 326 ntBASIC6.32□□□□□ -1.4
TPM3P06753 AC074255.1-201ENST00000511259 501 ntBASIC6.32□□□□□ -1.4
TPM3P06753 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
TPM3P06753 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.32□□□□□ -1.4
TPM3P06753 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.32□□□□□ -1.4
TPM3P06753 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.32□□□□□ -1.4
TPM3P06753 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.32□□□□□ -1.4
TPM3P06753 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.32□□□□□ -1.4
TPM3P06753 AC073136.1-201ENST00000449426 2884 ntBASIC6.32□□□□□ -1.4
TPM3P06753 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.32□□□□□ -1.4
TPM3P06753 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
TPM3P06753 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.32□□□□□ -1.4
TPM3P06753 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
TPM3P06753 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM3P06753 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.32□□□□□ -1.4
TPM3P06753 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM3P06753 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.31□□□□□ -1.4
TPM3P06753 TCP1P3-201ENST00000414406 1498 ntBASIC6.31□□□□□ -1.4
TPM3P06753 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TPM3P06753 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TPM3P06753 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TPM3P06753 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
TPM3P06753 RNU6-249P-201ENST00000363016 102 ntBASIC6.31□□□□□ -1.4
TPM3P06753 AC005042.1-201ENST00000393397 800 ntBASIC6.31□□□□□ -1.4
TPM3P06753 CTSL3P-202ENST00000412179 788 ntBASIC6.31□□□□□ -1.4
TPM3P06753 COX5BP7-201ENST00000414780 274 ntBASIC6.31□□□□□ -1.4
TPM3P06753 RPL7AP51-201ENST00000422016 760 ntBASIC6.31□□□□□ -1.4
TPM3P06753 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.31□□□□□ -1.4
TPM3P06753 NXT1P1-201ENST00000458481 316 ntBASIC6.31□□□□□ -1.4
TPM3P06753 GAPDHP71-201ENST00000511530 1003 ntBASIC6.31□□□□□ -1.4
TPM3P06753 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TPM3P06753 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM3P06753 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM3P06753 MIR3157-201ENST00000578688 85 ntBASIC6.31□□□□□ -1.4
TPM3P06753 DHFRP1-201ENST00000579682 559 ntBASIC6.31□□□□□ -1.4
TPM3P06753 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.31□□□□□ -1.4
TPM3P06753 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM3P06753 AC012368.3-201ENST00000604190 219 ntBASIC6.31□□□□□ -1.4
TPM3P06753 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM3P06753 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM3P06753 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM3P06753 AC024884.1-201ENST00000620583 399 ntBASIC6.31□□□□□ -1.4
TPM3P06753 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
TPM3P06753 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.31□□□□□ -1.4
TPM3P06753 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
TPM3P06753 AC093591.2-201ENST00000565254 3843 ntBASIC6.31□□□□□ -1.4
TPM3P06753 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
TPM3P06753 ADAM5-202ENST00000399789 1942 ntBASIC6.31□□□□□ -1.4
TPM3P06753 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
TPM3P06753 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
TPM3P06753 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TPM3P06753 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TPM3P06753 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.3□□□□□ -1.4
TPM3P06753 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TPM3P06753 AC022417.1-201ENST00000624768 1303 ntBASIC6.3□□□□□ -1.4
TPM3P06753 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TPM3P06753 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TPM3P06753 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TPM3P06753 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TPM3P06753 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
TPM3P06753 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.3□□□□□ -1.4
TPM3P06753 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms