Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AP005639.1-201ENST00000526939 192 ntBASIC6.28□□□□□ -1.4
RB1P06400 AC004825.1-201ENST00000555068 586 ntBASIC6.28□□□□□ -1.4
RB1P06400 MIR4433B-201ENST00000581329 102 ntBASIC6.28□□□□□ -1.4
RB1P06400 BNIP3P7-201ENST00000605641 516 ntBASIC6.28□□□□□ -1.4
RB1P06400 TCL6_3.1-201ENST00000619064 137 ntBASIC6.28□□□□□ -1.4
RB1P06400 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.28□□□□□ -1.4
RB1P06400 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
RB1P06400 MRRFP1-201ENST00000435941 1675 ntBASIC6.28□□□□□ -1.4
RB1P06400 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
RB1P06400 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RB1P06400 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
RB1P06400 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RB1P06400 AC092692.1-201ENST00000623625 2595 ntBASIC6.28□□□□□ -1.4
RB1P06400 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
RB1P06400 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RB1P06400 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.28□□□□□ -1.4
RB1P06400 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RB1P06400 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RB1P06400 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RB1P06400 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RB1P06400 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RB1P06400 LINC02019-201ENST00000608605 2060 ntBASIC6.27□□□□□ -1.41
RB1P06400 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RB1P06400 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RB1P06400 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RB1P06400 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RB1P06400 RNU4-64P-201ENST00000410795 131 ntBASIC6.27□□□□□ -1.41
RB1P06400 RN7SKP166-201ENST00000410812 305 ntBASIC6.27□□□□□ -1.41
RB1P06400 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.27□□□□□ -1.41
RB1P06400 PTCD2P2-201ENST00000415579 1095 ntBASIC6.27□□□□□ -1.41
RB1P06400 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.27□□□□□ -1.41
RB1P06400 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.27□□□□□ -1.41
RB1P06400 AC093166.4-201ENST00000457867 318 ntBASIC6.27□□□□□ -1.41
RB1P06400 RN7SL329P-201ENST00000467740 299 ntBASIC6.27□□□□□ -1.41
RB1P06400 RN7SL583P-201ENST00000475692 287 ntBASIC6.27□□□□□ -1.41
RB1P06400 RPL7P39-201ENST00000481157 744 ntBASIC6.27□□□□□ -1.41
RB1P06400 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.27□□□□□ -1.41
RB1P06400 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.27□□□□□ -1.41
RB1P06400 RNA5SP92-201ENST00000516437 110 ntBASIC6.27□□□□□ -1.41
RB1P06400 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.27□□□□□ -1.41
RB1P06400 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.27□□□□□ -1.41
RB1P06400 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.27□□□□□ -1.41
RB1P06400 HAUS8P1-201ENST00000549005 542 ntBASIC6.27□□□□□ -1.41
RB1P06400 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
RB1P06400 GMCL1P2-201ENST00000605230 823 ntBASIC6.27□□□□□ -1.41
RB1P06400 AC100814.1-201ENST00000606963 623 ntBASIC6.27□□□□□ -1.41
RB1P06400 AL356752.1-201ENST00000615844 593 ntBASIC6.27□□□□□ -1.41
RB1P06400 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RB1P06400 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.27□□□□□ -1.41
RB1P06400 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RB1P06400 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RB1P06400 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RB1P06400 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RB1P06400 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RB1P06400 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RB1P06400 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RB1P06400 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.27□□□□□ -1.41
RB1P06400 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RB1P06400 AC005618.1-201ENST00000606901 3148 ntBASIC6.27□□□□□ -1.41
RB1P06400 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RB1P06400 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.27□□□□□ -1.41
RB1P06400 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RB1P06400 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RB1P06400 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RB1P06400 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.26□□□□□ -1.41
RB1P06400 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RB1P06400 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.26□□□□□ -1.41
RB1P06400 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RB1P06400 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RB1P06400 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.26□□□□□ -1.41
RB1P06400 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RB1P06400 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RB1P06400 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RB1P06400 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RB1P06400 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RB1P06400 AC016583.1-201ENST00000624221 2431 ntBASIC6.26□□□□□ -1.41
RB1P06400 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RB1P06400 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.26□□□□□ -1.41
RB1P06400 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
RB1P06400 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.26□□□□□ -1.41
RB1P06400 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RB1P06400 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RB1P06400 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RB1P06400 AC009804.1-201ENST00000400949 179 ntBASIC6.26□□□□□ -1.41
RB1P06400 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.26□□□□□ -1.41
RB1P06400 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RB1P06400 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.26□□□□□ -1.41
RB1P06400 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.26□□□□□ -1.41
RB1P06400 AL390119.1-201ENST00000440329 312 ntBASIC6.26□□□□□ -1.41
RB1P06400 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.26□□□□□ -1.41
RB1P06400 CYCSP51-201ENST00000443545 318 ntBASIC6.26□□□□□ -1.41
RB1P06400 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 OR7E116P-201ENST00000448529 957 ntBASIC6.26□□□□□ -1.41
RB1P06400 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 LDHBP2-201ENST00000456969 1005 ntBASIC6.26□□□□□ -1.41
RB1P06400 AC093270.2-201ENST00000486157 792 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms