Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
P04436 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
P04436 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.26□□□□□ -1.57
P04436 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
P04436 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
P04436 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
P04436 AC083843.2-201ENST00000568248 6253 ntBASIC5.26□□□□□ -1.57
P04436 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
P04436 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.26□□□□□ -1.57
P04436 AC005224.3-201ENST00000584683 2140 ntBASIC5.26□□□□□ -1.57
P04436 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
P04436 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
P04436 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.25□□□□□ -1.57
P04436 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
P04436 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
P04436 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
P04436 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
P04436 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
P04436 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
P04436 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.25□□□□□ -1.57
P04436 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
P04436 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
P04436 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
P04436 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.25□□□□□ -1.57
P04436 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
P04436 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.25□□□□□ -1.57
P04436 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.25□□□□□ -1.57
P04436 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
P04436 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
P04436 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.25□□□□□ -1.57
P04436 AL159987.1-201ENST00000347911 293 ntBASIC5.25□□□□□ -1.57
P04436 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.25□□□□□ -1.57
P04436 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.25□□□□□ -1.57
P04436 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.25□□□□□ -1.57
P04436 NIFKP3-201ENST00000417799 865 ntBASIC5.25□□□□□ -1.57
P04436 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.25□□□□□ -1.57
P04436 RPS3AP38-201ENST00000435889 763 ntBASIC5.25□□□□□ -1.57
P04436 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.25□□□□□ -1.57
P04436 AL450996.1-201ENST00000445574 1202 ntBASIC5.25□□□□□ -1.57
P04436 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.25□□□□□ -1.57
P04436 AC023141.9-201ENST00000458734 412 ntBASIC5.25□□□□□ -1.57
P04436 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.25□□□□□ -1.57
P04436 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.25□□□□□ -1.57
P04436 AL136038.1-201ENST00000497246 351 ntBASIC5.25□□□□□ -1.57
P04436 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.25□□□□□ -1.57
P04436 snoU109.5-201ENST00000516231 132 ntBASIC5.25□□□□□ -1.57
P04436 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.25□□□□□ -1.57
P04436 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.25□□□□□ -1.57
P04436 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.25□□□□□ -1.57
P04436 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.25□□□□□ -1.57
P04436 AC096996.1-201ENST00000563813 325 ntBASIC5.25□□□□□ -1.57
P04436 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.25□□□□□ -1.57
P04436 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.25□□□□□ -1.57
P04436 AC006115.2-201ENST00000596823 202 ntBASIC5.25□□□□□ -1.57
P04436 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
P04436 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.25□□□□□ -1.57
P04436 FO393422.1-201ENST00000603908 708 ntBASIC5.25□□□□□ -1.57
P04436 AC008115.3-201ENST00000614874 549 ntBASIC5.25□□□□□ -1.57
P04436 AL049767.1-202ENST00000637826 242 ntBASIC5.25□□□□□ -1.57
P04436 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.25□□□□□ -1.57
P04436 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.25□□□□□ -1.57
P04436 AL161756.3-201ENST00000641216 2071 ntBASIC5.25□□□□□ -1.57
P04436 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
P04436 AL360270.2-201ENST00000562952 5985 ntBASIC5.25□□□□□ -1.57
P04436 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
P04436 ZNF402P-201ENST00000404435 3100 ntBASIC5.25□□□□□ -1.57
P04436 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
P04436 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.25□□□□□ -1.57
P04436 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
P04436 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.25□□□□□ -1.57
P04436 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
P04436 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
P04436 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.24□□□□□ -1.57
P04436 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
P04436 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
P04436 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
P04436 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
P04436 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
P04436 GTF2IP4-201ENST00000453092 2054 ntBASIC5.24□□□□□ -1.57
P04436 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
P04436 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
P04436 MIR143-201ENST00000385300 106 ntBASIC5.24□□□□□ -1.57
P04436 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
P04436 AL451046.1-201ENST00000406097 534 ntBASIC5.24□□□□□ -1.57
P04436 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.24□□□□□ -1.57
P04436 TNPO1P1-201ENST00000423641 1138 ntBASIC5.24□□□□□ -1.57
P04436 AC113412.1-201ENST00000425840 504 ntBASIC5.24□□□□□ -1.57
P04436 CRIP1P1-201ENST00000427567 185 ntBASIC5.24□□□□□ -1.57
P04436 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.24□□□□□ -1.57
P04436 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.24□□□□□ -1.57
P04436 AC004129.2-201ENST00000457229 287 ntBASIC5.24□□□□□ -1.57
P04436 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.24□□□□□ -1.57
P04436 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.24□□□□□ -1.57
P04436 AC138866.2-201ENST00000508650 584 ntBASIC5.24□□□□□ -1.57
P04436 AC011411.1-201ENST00000509592 876 ntBASIC5.24□□□□□ -1.57
P04436 TOMM22P4-201ENST00000511318 336 ntBASIC5.24□□□□□ -1.57
P04436 AC078899.1-201ENST00000521432 1185 ntBASIC5.24□□□□□ -1.57
P04436 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.24□□□□□ -1.57
P04436 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.24□□□□□ -1.57
P04436 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms