Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 BMS1P10-201ENST00000443754 1120 ntBASIC4.79□□□□□ -1.64
CD74P04233 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.79□□□□□ -1.64
CD74P04233 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.79□□□□□ -1.64
CD74P04233 OR52E3P-201ENST00000452083 936 ntBASIC4.79□□□□□ -1.64
CD74P04233 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.79□□□□□ -1.64
CD74P04233 NXT1P1-201ENST00000458481 316 ntBASIC4.79□□□□□ -1.64
CD74P04233 AC004890.1-201ENST00000461005 181 ntBASIC4.79□□□□□ -1.64
CD74P04233 RPS23P2-201ENST00000463671 415 ntBASIC4.79□□□□□ -1.64
CD74P04233 UBFD1P1-201ENST00000473259 814 ntBASIC4.79□□□□□ -1.64
CD74P04233 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD74P04233 RN7SL741P-201ENST00000482473 289 ntBASIC4.79□□□□□ -1.64
CD74P04233 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.79□□□□□ -1.64
CD74P04233 COX6B1P2-201ENST00000489624 230 ntBASIC4.79□□□□□ -1.64
CD74P04233 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.79□□□□□ -1.64
CD74P04233 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.79□□□□□ -1.64
CD74P04233 SNX18P25-201ENST00000510539 758 ntBASIC4.79□□□□□ -1.64
CD74P04233 SNORA74.1-201ENST00000516320 180 ntBASIC4.79□□□□□ -1.64
CD74P04233 RN7SKP253-201ENST00000516424 309 ntBASIC4.79□□□□□ -1.64
CD74P04233 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.79□□□□□ -1.64
CD74P04233 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD74P04233 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.79□□□□□ -1.64
CD74P04233 AC068993.1-201ENST00000546724 589 ntBASIC4.79□□□□□ -1.64
CD74P04233 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.79□□□□□ -1.64
CD74P04233 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD74P04233 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD74P04233 AC024267.2-201ENST00000582737 417 ntBASIC4.79□□□□□ -1.64
CD74P04233 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.79□□□□□ -1.64
CD74P04233 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.79□□□□□ -1.64
CD74P04233 AL451049.1-201ENST00000608672 497 ntBASIC4.79□□□□□ -1.64
CD74P04233 RFPL4AP6-201ENST00000616792 846 ntBASIC4.79□□□□□ -1.64
CD74P04233 MIR6503-201ENST00000622884 86 ntBASIC4.79□□□□□ -1.64
CD74P04233 OR11H2-202ENST00000641517 1085 ntBASIC4.79□□□□□ -1.64
CD74P04233 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CD74P04233 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD74P04233 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.79□□□□□ -1.64
CD74P04233 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD74P04233 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.79□□□□□ -1.64
CD74P04233 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CD74P04233 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CD74P04233 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD74P04233 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD74P04233 AC104964.3-201ENST00000606115 2860 ntBASIC4.79□□□□□ -1.64
CD74P04233 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CD74P04233 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CD74P04233 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD74P04233 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD74P04233 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CD74P04233 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD74P04233 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
CD74P04233 AC217777.1-201ENST00000570034 1471 ntBASIC4.78□□□□□ -1.64
CD74P04233 OR56A4-201ENST00000330728 1209 ntBASIC4.78□□□□□ -1.64
CD74P04233 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CD74P04233 RNU1-134P-201ENST00000362935 165 ntBASIC4.78□□□□□ -1.64
CD74P04233 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CD74P04233 AL050305.1-201ENST00000399993 1230 ntBASIC4.78□□□□□ -1.64
CD74P04233 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.78□□□□□ -1.64
CD74P04233 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.78□□□□□ -1.64
CD74P04233 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.78□□□□□ -1.64
CD74P04233 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.78□□□□□ -1.64
CD74P04233 RIMKLBP2-201ENST00000424737 654 ntBASIC4.78□□□□□ -1.64
CD74P04233 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD74P04233 DEFA9P-201ENST00000433042 285 ntBASIC4.78□□□□□ -1.64
CD74P04233 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 NANOGP9-201ENST00000439890 892 ntBASIC4.78□□□□□ -1.64
CD74P04233 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.78□□□□□ -1.64
CD74P04233 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.78□□□□□ -1.64
CD74P04233 RNU7-157P-201ENST00000459600 66 ntBASIC4.78□□□□□ -1.64
CD74P04233 RN7SL269P-201ENST00000467795 305 ntBASIC4.78□□□□□ -1.64
CD74P04233 AC117394.1-201ENST00000477323 567 ntBASIC4.78□□□□□ -1.64
CD74P04233 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 AC044810.1-201ENST00000480271 711 ntBASIC4.78□□□□□ -1.64
CD74P04233 AL117692.1-201ENST00000494283 713 ntBASIC4.78□□□□□ -1.64
CD74P04233 RN7SL649P-201ENST00000496974 275 ntBASIC4.78□□□□□ -1.64
CD74P04233 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CD74P04233 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.78□□□□□ -1.64
CD74P04233 AC112184.1-201ENST00000505179 312 ntBASIC4.78□□□□□ -1.64
CD74P04233 AC021106.1-201ENST00000509020 1058 ntBASIC4.78□□□□□ -1.64
CD74P04233 AC016559.2-201ENST00000510759 359 ntBASIC4.78□□□□□ -1.64
CD74P04233 AC074255.1-201ENST00000511259 501 ntBASIC4.78□□□□□ -1.64
CD74P04233 AC091912.1-201ENST00000511351 248 ntBASIC4.78□□□□□ -1.64
CD74P04233 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.78□□□□□ -1.64
CD74P04233 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.78□□□□□ -1.64
CD74P04233 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.78□□□□□ -1.64
CD74P04233 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.78□□□□□ -1.64
CD74P04233 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CD74P04233 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.78□□□□□ -1.64
CD74P04233 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CD74P04233 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 AC040958.1-201ENST00000561102 201 ntBASIC4.78□□□□□ -1.64
CD74P04233 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.78□□□□□ -1.64
CD74P04233 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms