Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UPK1AO00322 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
UPK1AO00322 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
UPK1AO00322 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
UPK1AO00322 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
UPK1AO00322 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.34□□□□□ -1.55
UPK1AO00322 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.34□□□□□ -1.55
UPK1AO00322 AL159987.1-201ENST00000347911 293 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
UPK1AO00322 RNA5SP326-201ENST00000363209 110 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 PEX12P1-201ENST00000400284 1048 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 OR7E101P-201ENST00000400428 513 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 RNU2-18P-201ENST00000411224 162 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 AC096921.1-201ENST00000411661 375 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
UPK1AO00322 HMGN2P27-201ENST00000427352 270 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.34□□□□□ -1.55
UPK1AO00322 AL512637.1-201ENST00000439523 1231 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 HLA-DPA3-207ENST00000454398 229 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.34□□□□□ -1.55
UPK1AO00322 RPSAP37-201ENST00000470913 821 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 RPL32P33-201ENST00000487023 394 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 AC009120.1-201ENST00000493458 473 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.34□□□□□ -1.55
UPK1AO00322 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.34□□□□□ -1.55
UPK1AO00322 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.34□□□□□ -1.55
UPK1AO00322 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.34□□□□□ -1.55
UPK1AO00322 AC139697.1-201ENST00000548429 745 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 AL359219.2-201ENST00000555184 348 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.34□□□□□ -1.55
UPK1AO00322 DHFRP1-201ENST00000579682 559 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.34□□□□□ -1.55
UPK1AO00322 AC009237.13-201ENST00000603193 276 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 AC108865.2-201ENST00000606881 432 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.34□□□□□ -1.55
UPK1AO00322 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.34□□□□□ -1.55
UPK1AO00322 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.34□□□□□ -1.55
UPK1AO00322 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPK1AO00322 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.34□□□□□ -1.56
UPK1AO00322 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
UPK1AO00322 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
UPK1AO00322 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
UPK1AO00322 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
UPK1AO00322 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.56
UPK1AO00322 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UPK1AO00322 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
UPK1AO00322 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
UPK1AO00322 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
UPK1AO00322 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
UPK1AO00322 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.33□□□□□ -1.56
UPK1AO00322 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
UPK1AO00322 OR7E25P-201ENST00000344844 931 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
UPK1AO00322 AC005042.1-201ENST00000393397 800 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 RN7SKP240-201ENST00000410583 375 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.33□□□□□ -1.56
UPK1AO00322 CDY8P-201ENST00000428380 1279 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.33□□□□□ -1.56
UPK1AO00322 NPM1P25-201ENST00000429734 854 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.33□□□□□ -1.56
UPK1AO00322 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.33□□□□□ -1.56
UPK1AO00322 DNAJA1P5-201ENST00000440278 943 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 CDY20P-201ENST00000447528 1279 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.33□□□□□ -1.56
UPK1AO00322 AC006499.4-201ENST00000510947 694 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.33□□□□□ -1.56
UPK1AO00322 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.33□□□□□ -1.56
UPK1AO00322 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.33□□□□□ -1.56
UPK1AO00322 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.33□□□□□ -1.56
UPK1AO00322 AC092121.1-201ENST00000569452 202 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.33□□□□□ -1.56
UPK1AO00322 AC079315.1-201ENST00000602952 623 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 AL138895.2-201ENST00000603019 178 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UPK1AO00322 AL139124.1-201ENST00000609123 421 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 AC090607.5-201ENST00000615692 224 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.33□□□□□ -1.56
UPK1AO00322 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.33□□□□□ -1.56
UPK1AO00322 AC129915.3-201ENST00000634128 948 ntBASIC5.33□□□□□ -1.56
UPK1AO00322 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms