Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC026700.1-201ENST00000512074 544 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 IGLVIV-59-201ENST00000520218 250 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 OR6M2P-201ENST00000529831 871 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AC020910.2-201ENST00000603635 610 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AC007262.1-201ENST00000604099 321 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AL442067.2-201ENST00000614033 363 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AP001506.1-201ENST00000615444 211 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AC108479.2-201ENST00000617314 601 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AC006328.2-201ENST00000623198 397 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AC012005.2-201ENST00000624333 397 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AP003400.3-201ENST00000624904 346 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 OR5M2P-202ENST00000641241 4242 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 AC025040.2-201ENST00000558657 1852 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 CYP1D1P-201ENST00000416662 1433 ntBASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHB11Q9Y5F2 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7.59□□□□□ -1.2
PCDHB11Q9Y5F2 AC093909.5-201ENST00000621839 1799 ntBASIC7.59□□□□□ -1.2
PCDHB11Q9Y5F2 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC074375.1-201ENST00000372993 192 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 H2AFZP3-201ENST00000394213 387 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 EI24P3-201ENST00000399046 1062 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 SNORA11C-201ENST00000408532 129 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 ERMN-204ENST00000409925 556 ntTSL 4 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC109780.2-201ENST00000413467 845 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 RPS27AP14-201ENST00000422868 454 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC093084.1-201ENST00000424233 687 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 MTCO1P20-201ENST00000425366 358 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 NPM1P22-201ENST00000427761 952 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 VDAC1P6-201ENST00000430062 855 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 GAPDHP32-201ENST00000433816 998 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 RPL7L1P11-201ENST00000446092 721 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 MED28P8-201ENST00000454831 521 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC110749.1-201ENST00000462007 357 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC092757.1-201ENST00000467293 467 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AL928654.1-201ENST00000476081 354 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC018475.1-201ENST00000478358 465 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 RPS29P25-201ENST00000481709 171 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC108078.3-201ENST00000502633 489 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 Y_RNA.675-201ENST00000516389 149 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AF235103.2-201ENST00000525753 346 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC090971.3-201ENST00000557871 1041 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC137800.2-201ENST00000574375 120 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC136618.2-201ENST00000575091 400 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC022239.4-201ENST00000602626 504 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC129492.5-201ENST00000603489 315 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AL596327.1-201ENST00000603629 213 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AC087893.2-201ENST00000623272 255 ntBASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC7.58□□□□□ -1.2
PCDHB11Q9Y5F2 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms