Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC012254.5-201ENST00000623573 478 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AP000577.1-201ENST00000624366 878 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC018659.2-201ENST00000624690 715 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AL392088.2-201ENST00000637607 285 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 OR10AB1P-202ENST00000641219 1686 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC137056.2-201ENST00000624055 1958 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 RNU6-236P-201ENST00000363886 106 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 Y_RNA.472-201ENST00000384322 102 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 RNA5SP53-201ENST00000391299 120 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AP003170.5-201ENST00000397185 335 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AL096711.1-201ENST00000404780 554 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 RNA5SP280-201ENST00000411230 115 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 MTND4P20-201ENST00000424125 869 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 MYO5BP3-201ENST00000431872 1279 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 NMNAT1P3-201ENST00000457517 888 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AC005165.2-201ENST00000466070 380 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AC108734.3-201ENST00000481241 1165 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 MTND3P5-201ENST00000512798 333 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 MTND5P13-201ENST00000513046 1079 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 IGLV3-6-201ENST00000523937 250 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 NDUFS5P6-201ENST00000529136 295 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 BTG1P1-201ENST00000540396 508 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AC023813.2-201ENST00000564321 469 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AC007346.1-201ENST00000569208 867 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AC106785.4-201ENST00000569492 412 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 MTATP6P3-201ENST00000581686 676 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 MIR4801-201ENST00000582704 82 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 MIR4428-201ENST00000584884 73 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AC015802.2-201ENST00000589690 189 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AL021707.7-201ENST00000607991 416 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AL138478.1-201ENST00000612252 832 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 OR8G3P-202ENST00000641572 1255 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AC104446.1-201ENST00000613728 1321 ntBASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.94□□□□□ -1.3
FOXP3Q9BZS1 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms