Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 MIMT1-201ENST00000597105 1050 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 FAM27E4-201ENST00000605259 342 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AC025171.4-201ENST00000607250 1047 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AL512329.2-201ENST00000607350 548 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AC018926.1-201ENST00000616335 435 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AL445984.1-201ENST00000637834 659 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AC022325.1-201ENST00000502748 2199 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 ZNF658B-201ENST00000602828 3408 ntBASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SMC1BQ8NDV3 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 SELENOWP1-201ENST00000322792 252 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 HMGB1P20-201ENST00000402555 677 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 AC069282.1-201ENST00000411911 526 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 UBE2D3P3-201ENST00000426992 425 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 NPM1P25-201ENST00000429734 854 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 CNOT7P2-201ENST00000441051 832 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 RPL23AP73-201ENST00000492507 471 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 AL158050.2-201ENST00000605336 568 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 AC112503.2-201ENST00000609005 552 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 AL121612.2-201ENST00000612261 482 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 AC005156.1-201ENST00000613371 573 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 CU639417.4-201ENST00000623928 207 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 AP001784.1-201ENST00000624107 428 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 AP000641.1-201ENST00000531988 1639 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 AL161756.3-201ENST00000641216 2071 ntBASIC7.36□□□□□ -1.23
SMC1BQ8NDV3 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 WBP11P1-201ENST00000562560 1931 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 RNU1-24P-201ENST00000364285 165 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 RNU6-40P-201ENST00000384254 107 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AL645733.1-201ENST00000402250 217 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 Z84478.1-201ENST00000438230 1219 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AL513321.1-201ENST00000441175 761 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 RPL31P20-201ENST00000449593 360 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 HIGD1AP8-201ENST00000453927 274 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AP002345.1-201ENST00000456493 928 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 GYG1P1-201ENST00000460864 698 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 CABYRP1-201ENST00000465493 1045 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 RPL23AP64-201ENST00000469465 435 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AC093663.2-201ENST00000484625 313 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 Y_RNA.710-201ENST00000516975 110 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 CDC42P3-201ENST00000518493 633 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AP000662.1-201ENST00000530952 487 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 OSBPL9P3-201ENST00000534523 595 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AP001858.2-201ENST00000536213 601 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms