Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 AC006530.1-201ENST00000555980 571 ntBASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 MIR6780B-201ENST00000610307 79 ntBASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 AC024884.1-201ENST00000620583 399 ntBASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 AC073593.1-201ENST00000624500 411 ntBASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TTC9CQ8N5M4 AC144833.1-201ENST00000567953 4089 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 RNA5SP453-201ENST00000362503 119 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 RNA5SP187-201ENST00000384400 119 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 RNA5SP91-201ENST00000390902 119 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AC004386.1-201ENST00000393214 761 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 RN7SKP29-201ENST00000410957 272 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 HMGN2P27-201ENST00000427352 270 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 OR7E116P-201ENST00000448529 957 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 RPL12P39-201ENST00000455456 496 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AC025458.1-201ENST00000506046 166 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AC027369.2-201ENST00000528030 440 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AP000648.1-201ENST00000529682 397 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AC024405.1-201ENST00000532521 1042 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 LINC00556-201ENST00000569603 412 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AC090286.3-201ENST00000573133 187 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AP001357.1-201ENST00000586304 1053 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 HIRAP1-201ENST00000605318 787 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AL031601.1-201ENST00000605702 394 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 AC019072.1-201ENST00000604535 1551 ntBASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TTC9CQ8N5M4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TTC9CQ8N5M4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TTC9CQ8N5M4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.55□□□□□ -1.68
TTC9CQ8N5M4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TTC9CQ8N5M4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TTC9CQ8N5M4 OR9K1P-202ENST00000641111 3217 ntBASIC4.55□□□□□ -1.68
TTC9CQ8N5M4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
TTC9CQ8N5M4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms