Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 RN7SKP227-201ENST00000364445 330 ntBASIC5.53□□□□□ -1.52
RIF1Q5UIP0 RNU4-2-201ENST00000365668 141 ntBASIC5.53□□□□□ -1.52
RIF1Q5UIP0 AC093655.2-201ENST00000425735 631 ntBASIC5.53□□□□□ -1.52
RIF1Q5UIP0 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 AC008072.1-201ENST00000434254 824 ntBASIC5.53□□□□□ -1.52
RIF1Q5UIP0 RPL23AP60-201ENST00000450011 454 ntBASIC5.53□□□□□ -1.52
RIF1Q5UIP0 AC106730.2-201ENST00000566641 540 ntBASIC5.53□□□□□ -1.52
RIF1Q5UIP0 MIR4270-201ENST00000581799 70 ntBASIC5.53□□□□□ -1.52
RIF1Q5UIP0 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 XRCC6P5-201ENST00000435236 1795 ntBASIC5.53□□□□□ -1.52
RIF1Q5UIP0 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 AC105235.1-201ENST00000623208 1816 ntBASIC5.53□□□□□ -1.52
RIF1Q5UIP0 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 AL389915.1-201ENST00000422463 466 ntBASIC5.53□□□□□ -1.52
RIF1Q5UIP0 AC009480.2-201ENST00000422916 432 ntBASIC5.53□□□□□ -1.52
RIF1Q5UIP0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 AC008147.3-201ENST00000548666 354 ntBASIC5.53□□□□□ -1.52
RIF1Q5UIP0 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 RNU4ATAC-201ENST00000580972 127 ntBASIC5.53□□□□□ -1.52
RIF1Q5UIP0 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RIF1Q5UIP0 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.52□□□□□ -1.52
RIF1Q5UIP0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 OR55B1P-203ENST00000641518 2602 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 AC234779.1-201ENST00000425910 285 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 snoU13.1-201ENST00000459157 104 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 AC073610.1-201ENST00000489971 396 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 BTF3P13-201ENST00000513224 490 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 MRPS21P7-201ENST00000566937 238 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 AC019193.2-201ENST00000610012 634 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 AC068724.3-201ENST00000625906 87 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 NEK2P4-201ENST00000425793 1329 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 AL512310.3-201ENST00000547023 1335 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 DYNC1I2P1-201ENST00000435916 1838 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 AC105749.1-201ENST00000631338 2008 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 RNU1-43P-201ENST00000365052 165 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 RNA5SP30-201ENST00000365552 115 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 SNORA48.7-201ENST00000391302 135 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 RNA5SP487-201ENST00000410186 122 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 KCTD10P1-201ENST00000434203 625 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 NDUFA12P1-201ENST00000455914 406 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 RNA5SP373-201ENST00000517271 95 ntBASIC5.52□□□□□ -1.53
RIF1Q5UIP0 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RIF1Q5UIP0 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms