Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC132825.7-201ENST00000638744 335 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 ZNF733P-202ENST00000444809 1573 ntBASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC7.4□□□□□ -1.22
CCDC144BQ3MJ40 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
CCDC144BQ3MJ40 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.4□□□□□ -1.23
CCDC144BQ3MJ40 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CCDC144BQ3MJ40 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CCDC144BQ3MJ40 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CCDC144BQ3MJ40 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
CCDC144BQ3MJ40 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 HMGB1P13-201ENST00000406019 642 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 ATF1P1-201ENST00000406040 927 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AL445183.3-201ENST00000414168 502 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AL354707.3-201ENST00000427308 331 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 RRM2P4-201ENST00000441721 562 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 TPT1P1-201ENST00000458495 518 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AC094085.1-201ENST00000468914 584 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 RPL5P14-201ENST00000494197 878 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 RNU6-1308P-201ENST00000516817 103 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AC090115.2-201ENST00000548060 883 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AC005277.2-201ENST00000617898 390 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 MIR6811-201ENST00000620409 58 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AC018692.2-201ENST00000624130 348 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AC006927.4-201ENST00000639187 543 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 IMMTP1-201ENST00000435590 2219 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 AL121950.1-201ENST00000624993 2077 ntBASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC144BQ3MJ40 NCOA4P2-201ENST00000340589 1813 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 SNX18P3-202ENST00000565670 1750 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 RNA5SP188-201ENST00000362916 129 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 SNORA70H-201ENST00000383910 135 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 SNORA70J-201ENST00000384182 135 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 RNU6-298P-201ENST00000390888 96 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 ANAPC10P1-201ENST00000395991 556 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC007568.1-201ENST00000422912 471 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 OR5W1P-201ENST00000423705 938 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC005189.1-201ENST00000431286 310 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC098826.2-201ENST00000452011 651 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 HSPE1P22-201ENST00000456856 327 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 RPS20P4-201ENST00000461659 355 ntBASIC7.38□□□□□ -1.23
CCDC144BQ3MJ40 HMGB1P38-201ENST00000490557 577 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms