Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.41□□□□□ -1.22
COL16A1Q07092 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
COL16A1Q07092 USP9YP3-201ENST00000434481 1766 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL16A1Q07092 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL16A1Q07092 AC092724.1-201ENST00000624623 3397 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC7.41□□□□□ -1.22
COL16A1Q07092 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.41□□□□□ -1.22
COL16A1Q07092 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
COL16A1Q07092 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.41□□□□□ -1.22
COL16A1Q07092 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.41□□□□□ -1.22
COL16A1Q07092 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
COL16A1Q07092 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC7.41□□□□□ -1.22
COL16A1Q07092 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.41□□□□□ -1.22
COL16A1Q07092 AC004975.1-201ENST00000428733 208 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 GSTM5P1-201ENST00000434751 660 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 AL590399.4-201ENST00000436561 601 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 OR7A15P-201ENST00000449848 1009 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC7.41□□□□□ -1.22
COL16A1Q07092 BZW1P1-201ENST00000454901 1240 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.41□□□□□ -1.22
COL16A1Q07092 RN7SKP122-201ENST00000515923 296 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC7.41□□□□□ -1.22
COL16A1Q07092 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.41□□□□□ -1.22
COL16A1Q07092 PARP1P2-201ENST00000556806 195 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 MIR3160-1-201ENST00000577972 85 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL16A1Q07092 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.41□□□□□ -1.22
COL16A1Q07092 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL16A1Q07092 AC015660.5-201ENST00000623238 564 ntBASIC7.41□□□□□ -1.22
COL16A1Q07092 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
COL16A1Q07092 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.41□□□□□ -1.22
COL16A1Q07092 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL16A1Q07092 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL16A1Q07092 AC007998.4-201ENST00000612496 2533 ntBASIC7.4□□□□□ -1.22
COL16A1Q07092 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.4□□□□□ -1.22
COL16A1Q07092 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL16A1Q07092 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL16A1Q07092 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC7.4□□□□□ -1.22
COL16A1Q07092 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL16A1Q07092 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL16A1Q07092 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL16A1Q07092 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL16A1Q07092 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL16A1Q07092 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL16A1Q07092 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL16A1Q07092 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL16A1Q07092 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL16A1Q07092 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL16A1Q07092 EI24P4-201ENST00000423683 1078 ntBASIC7.4□□□□□ -1.22
COL16A1Q07092 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.4□□□□□ -1.22
COL16A1Q07092 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.4□□□□□ -1.22
COL16A1Q07092 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.4□□□□□ -1.22
COL16A1Q07092 IGKV2D-10-201ENST00000520194 281 ntBASIC7.4□□□□□ -1.22
COL16A1Q07092 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC7.4□□□□□ -1.22
COL16A1Q07092 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC7.4□□□□□ -1.22
COL16A1Q07092 MIR4675-201ENST00000577898 77 ntBASIC7.4□□□□□ -1.22
COL16A1Q07092 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL16A1Q07092 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL16A1Q07092 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL16A1Q07092 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.4□□□□□ -1.23
COL16A1Q07092 AC006213.6-201ENST00000623722 4179 ntBASIC7.39□□□□□ -1.23
COL16A1Q07092 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL16A1Q07092 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL16A1Q07092 AL121768.1-201ENST00000613917 2544 ntBASIC7.39□□□□□ -1.23
COL16A1Q07092 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC7.39□□□□□ -1.23
COL16A1Q07092 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL16A1Q07092 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL16A1Q07092 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL16A1Q07092 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.39□□□□□ -1.23
COL16A1Q07092 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.39□□□□□ -1.23
COL16A1Q07092 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL16A1Q07092 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
COL16A1Q07092 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC7.39□□□□□ -1.23
COL16A1Q07092 AC068287.1-201ENST00000430283 295 ntBASIC7.39□□□□□ -1.23
COL16A1Q07092 FTH1P8-201ENST00000498161 514 ntBASIC7.39□□□□□ -1.23
COL16A1Q07092 MTND6P2-201ENST00000512226 524 ntBASIC7.39□□□□□ -1.23
COL16A1Q07092 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.39□□□□□ -1.23
COL16A1Q07092 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.39□□□□□ -1.23
COL16A1Q07092 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.39□□□□□ -1.23
COL16A1Q07092 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC7.39□□□□□ -1.23
COL16A1Q07092 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.39□□□□□ -1.23
COL16A1Q07092 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.39□□□□□ -1.23
COL16A1Q07092 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL16A1Q07092 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL16A1Q07092 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.39□□□□□ -1.23
COL16A1Q07092 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL16A1Q07092 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
COL16A1Q07092 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
COL16A1Q07092 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL16A1Q07092 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
COL16A1Q07092 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL16A1Q07092 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.38□□□□□ -1.23
COL16A1Q07092 RNU2-50P-201ENST00000410494 143 ntBASIC7.38□□□□□ -1.23
COL16A1Q07092 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.38□□□□□ -1.23
COL16A1Q07092 TMEM183AP1-205ENST00000432739 290 ntBASIC7.38□□□□□ -1.23
COL16A1Q07092 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC7.38□□□□□ -1.23
COL16A1Q07092 RPL5P25-201ENST00000441148 775 ntBASIC7.38□□□□□ -1.23
COL16A1Q07092 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.38□□□□□ -1.23
COL16A1Q07092 AL451063.1-201ENST00000450164 1133 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms