Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCNA1P78396 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCNA1P78396 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CCNA1P78396 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CCNA1P78396 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCNA1P78396 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCNA1P78396 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCNA1P78396 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCNA1P78396 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.59□□□□□ -1.35
CCNA1P78396 SETP9-201ENST00000423837 832 ntBASIC6.59□□□□□ -1.35
CCNA1P78396 NPM1P22-201ENST00000427761 952 ntBASIC6.59□□□□□ -1.35
CCNA1P78396 MRPS21P3-201ENST00000436696 262 ntBASIC6.59□□□□□ -1.35
CCNA1P78396 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.59□□□□□ -1.35
CCNA1P78396 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.59□□□□□ -1.35
CCNA1P78396 RANP1-206ENST00000455094 651 ntBASIC6.59□□□□□ -1.35
CCNA1P78396 AC024558.1-201ENST00000505008 528 ntBASIC6.59□□□□□ -1.35
CCNA1P78396 HIGD1AP14-201ENST00000507617 282 ntBASIC6.59□□□□□ -1.35
CCNA1P78396 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.59□□□□□ -1.35
CCNA1P78396 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCNA1P78396 RN7SKP288-201ENST00000516227 268 ntBASIC6.59□□□□□ -1.35
CCNA1P78396 RNU6-964P-201ENST00000516524 69 ntBASIC6.59□□□□□ -1.35
CCNA1P78396 MIR2117-201ENST00000516780 80 ntBASIC6.59□□□□□ -1.35
CCNA1P78396 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.59□□□□□ -1.35
CCNA1P78396 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.59□□□□□ -1.35
CCNA1P78396 OR4A40P-201ENST00000533878 948 ntBASIC6.59□□□□□ -1.35
CCNA1P78396 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.59□□□□□ -1.35
CCNA1P78396 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.59□□□□□ -1.35
CCNA1P78396 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.59□□□□□ -1.35
CCNA1P78396 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.59□□□□□ -1.35
CCNA1P78396 MRPS21P7-201ENST00000566937 238 ntBASIC6.59□□□□□ -1.35
CCNA1P78396 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.59□□□□□ -1.35
CCNA1P78396 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.59□□□□□ -1.35
CCNA1P78396 IMMTP1-201ENST00000435590 2219 ntBASIC6.59□□□□□ -1.35
CCNA1P78396 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.59□□□□□ -1.35
CCNA1P78396 LINC01963-201ENST00000562038 3148 ntBASIC6.59□□□□□ -1.35
CCNA1P78396 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCNA1P78396 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCNA1P78396 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.59□□□□□ -1.35
CCNA1P78396 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
CCNA1P78396 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.59□□□□□ -1.35
CCNA1P78396 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCNA1P78396 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.59□□□□□ -1.36
CCNA1P78396 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
CCNA1P78396 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCNA1P78396 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCNA1P78396 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CCNA1P78396 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCNA1P78396 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNA1P78396 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.58□□□□□ -1.36
CCNA1P78396 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.58□□□□□ -1.36
CCNA1P78396 ICE2P1-201ENST00000512800 1849 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CCNA1P78396 AL161756.3-201ENST00000641216 2071 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNA1P78396 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNA1P78396 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.58□□□□□ -1.36
CCNA1P78396 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNA1P78396 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNA1P78396 AC016027.5-201ENST00000427227 210 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.58□□□□□ -1.36
CCNA1P78396 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNA1P78396 AL731534.1-201ENST00000434711 269 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 AC015983.1-201ENST00000441577 373 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 CT45A11P-201ENST00000448043 1134 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 AL451063.1-201ENST00000450164 1133 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 AL450023.1-201ENST00000450868 751 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 RN7SL172P-201ENST00000460535 303 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.58□□□□□ -1.36
CCNA1P78396 RPL38P3-201ENST00000484463 213 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 UBA52P7-201ENST00000486088 380 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.58□□□□□ -1.36
CCNA1P78396 AC090638.1-201ENST00000498296 909 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCNA1P78396 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.58□□□□□ -1.36
CCNA1P78396 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.58□□□□□ -1.36
CCNA1P78396 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNA1P78396 AL049779.2-201ENST00000553847 315 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 AC096996.1-201ENST00000563813 325 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
CCNA1P78396 MIR4301-201ENST00000577203 66 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 MIR132-201ENST00000591554 101 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 AC137695.1-201ENST00000604126 489 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 PPATP2-201ENST00000605635 508 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 AL353684.1-201ENST00000622677 1120 ntBASIC6.58□□□□□ -1.36
CCNA1P78396 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.58□□□□□ -1.36
CCNA1P78396 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.58□□□□□ -1.36
CCNA1P78396 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNA1P78396 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNA1P78396 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
CCNA1P78396 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNA1P78396 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNA1P78396 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNA1P78396 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNA1P78396 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCNA1P78396 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNA1P78396 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNA1P78396 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNA1P78396 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNA1P78396 AC034229.2-201ENST00000566945 2508 ntBASIC6.57□□□□□ -1.36
CCNA1P78396 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms