Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VSX2P58304 RNA5SP394-201ENST00000364216 119 ntBASIC5.52□□□□□ -1.53
VSX2P58304 RN7SKP78-201ENST00000364711 318 ntBASIC5.52□□□□□ -1.53
VSX2P58304 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VSX2P58304 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.52□□□□□ -1.53
VSX2P58304 MRPS21P2-201ENST00000424704 264 ntBASIC5.52□□□□□ -1.53
VSX2P58304 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VSX2P58304 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.52□□□□□ -1.53
VSX2P58304 AC096775.1-201ENST00000437724 448 ntBASIC5.52□□□□□ -1.53
VSX2P58304 AL161636.2-201ENST00000445179 927 ntBASIC5.52□□□□□ -1.53
VSX2P58304 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.52□□□□□ -1.53
VSX2P58304 RPS23P6-201ENST00000466136 431 ntBASIC5.52□□□□□ -1.53
VSX2P58304 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.52□□□□□ -1.53
VSX2P58304 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSX2P58304 AC006539.1-201ENST00000481419 501 ntBASIC5.52□□□□□ -1.53
VSX2P58304 AC022215.1-201ENST00000481770 362 ntBASIC5.52□□□□□ -1.53
VSX2P58304 RPL7P51-201ENST00000490532 749 ntBASIC5.52□□□□□ -1.53
VSX2P58304 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VSX2P58304 AC109481.1-201ENST00000509173 282 ntBASIC5.52□□□□□ -1.53
VSX2P58304 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.52□□□□□ -1.53
VSX2P58304 CYCSP22-201ENST00000517555 339 ntBASIC5.52□□□□□ -1.53
VSX2P58304 AC139365.2-201ENST00000517972 253 ntBASIC5.52□□□□□ -1.53
VSX2P58304 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.52□□□□□ -1.53
VSX2P58304 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.52□□□□□ -1.53
VSX2P58304 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
VSX2P58304 MIR6862-1-201ENST00000613016 70 ntBASIC5.52□□□□□ -1.53
VSX2P58304 MIR6862-2-201ENST00000614755 70 ntBASIC5.52□□□□□ -1.53
VSX2P58304 RN7SL544P-201ENST00000617232 284 ntBASIC5.52□□□□□ -1.53
VSX2P58304 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.52□□□□□ -1.53
VSX2P58304 RN7SL763P-201ENST00000620922 284 ntBASIC5.52□□□□□ -1.53
VSX2P58304 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.52□□□□□ -1.53
VSX2P58304 AC000095.2-202ENST00000637415 154 ntBASIC5.52□□□□□ -1.53
VSX2P58304 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
VSX2P58304 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.52□□□□□ -1.53
VSX2P58304 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.52□□□□□ -1.53
VSX2P58304 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VSX2P58304 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSX2P58304 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.52□□□□□ -1.53
VSX2P58304 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VSX2P58304 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSX2P58304 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.52□□□□□ -1.53
VSX2P58304 KARSP1-201ENST00000451871 1752 ntBASIC5.52□□□□□ -1.53
VSX2P58304 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.52□□□□□ -1.53
VSX2P58304 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VSX2P58304 CASC19-260ENST00000641828 2001 ntBASIC5.52□□□□□ -1.53
VSX2P58304 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
VSX2P58304 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.51□□□□□ -1.53
VSX2P58304 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VSX2P58304 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
VSX2P58304 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.51□□□□□ -1.53
VSX2P58304 AC016745.2-201ENST00000608834 3443 ntBASIC5.51□□□□□ -1.53
VSX2P58304 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VSX2P58304 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.51□□□□□ -1.53
VSX2P58304 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VSX2P58304 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VSX2P58304 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VSX2P58304 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.51□□□□□ -1.53
VSX2P58304 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VSX2P58304 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
VSX2P58304 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VSX2P58304 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VSX2P58304 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.51□□□□□ -1.53
VSX2P58304 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.51□□□□□ -1.53
VSX2P58304 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.51□□□□□ -1.53
VSX2P58304 AC064862.4-201ENST00000442180 334 ntBASIC5.51□□□□□ -1.53
VSX2P58304 HMGN1P36-201ENST00000446623 298 ntBASIC5.51□□□□□ -1.53
VSX2P58304 OR2AF1P-201ENST00000454899 889 ntBASIC5.51□□□□□ -1.53
VSX2P58304 AC018638.3-201ENST00000461273 132 ntBASIC5.51□□□□□ -1.53
VSX2P58304 RPSAP37-201ENST00000470913 821 ntBASIC5.51□□□□□ -1.53
VSX2P58304 RPS17P15-201ENST00000475609 349 ntBASIC5.51□□□□□ -1.53
VSX2P58304 AC021678.3-201ENST00000517893 476 ntBASIC5.51□□□□□ -1.53
VSX2P58304 AC135626.1-201ENST00000556983 435 ntBASIC5.51□□□□□ -1.53
VSX2P58304 NPM1P5-201ENST00000557228 838 ntBASIC5.51□□□□□ -1.53
VSX2P58304 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.51□□□□□ -1.53
VSX2P58304 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.51□□□□□ -1.53
VSX2P58304 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.51□□□□□ -1.53
VSX2P58304 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.51□□□□□ -1.53
VSX2P58304 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.51□□□□□ -1.53
VSX2P58304 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.51□□□□□ -1.53
VSX2P58304 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VSX2P58304 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
VSX2P58304 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
VSX2P58304 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VSX2P58304 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VSX2P58304 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VSX2P58304 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VSX2P58304 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
VSX2P58304 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VSX2P58304 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
VSX2P58304 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VSX2P58304 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VSX2P58304 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.5□□□□□ -1.53
VSX2P58304 AC117409.1-201ENST00000470499 1310 ntBASIC5.5□□□□□ -1.53
VSX2P58304 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.5□□□□□ -1.53
VSX2P58304 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
VSX2P58304 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VSX2P58304 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
VSX2P58304 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VSX2P58304 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
VSX2P58304 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms