Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN6P56747 AL731532.1-201ENST00000623972 4236 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN6P56747 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLDN6P56747 RNU1-77P-201ENST00000390868 162 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 AC009804.1-201ENST00000400949 179 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN6P56747 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN6P56747 RPS21P8-201ENST00000413365 247 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 RPL7L1P9-201ENST00000431298 745 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 FRG2FP-204ENST00000453982 852 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN6P56747 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN6P56747 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN6P56747 TPM3P3-201ENST00000521343 354 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN6P56747 HAUS8P1-201ENST00000549005 542 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 IGBP1P1-201ENST00000554337 1009 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN6P56747 AC119403.2-201ENST00000590960 598 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 AL021368.3-201ENST00000607119 578 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 AL512329.2-201ENST00000607350 548 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 AL139099.4-201ENST00000614802 114 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN6P56747 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN6P56747 AL353763.1-201ENST00000624467 1628 ntBASIC5.58□□□□□ -1.52
CLDN6P56747 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN6P56747 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CLDN6P56747 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
CLDN6P56747 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN6P56747 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN6P56747 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN6P56747 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN6P56747 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLDN6P56747 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN6P56747 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN6P56747 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN6P56747 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN6P56747 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN6P56747 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN6P56747 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN6P56747 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN6P56747 AL159987.1-201ENST00000347911 293 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 RNA5SP507-201ENST00000363603 121 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 SNORA70.9-201ENST00000384370 135 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 AL360271.1-201ENST00000395679 510 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 AL121835.1-201ENST00000404250 354 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN6P56747 NME1P1-201ENST00000420914 382 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 AC099677.3-201ENST00000427081 395 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 AL022331.1-201ENST00000429025 477 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN6P56747 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN6P56747 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN6P56747 AP000547.1-201ENST00000454360 617 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 RN7SL329P-201ENST00000467740 299 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 RPS17P15-201ENST00000475609 349 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 AC099521.1-201ENST00000482557 334 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 AC072052.1-201ENST00000496556 306 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN6P56747 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN6P56747 AC139365.2-201ENST00000517972 253 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.57□□□□□ -1.52
CLDN6P56747 OR7E158P-201ENST00000524483 910 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 OR4A6P-201ENST00000534364 970 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.57□□□□□ -1.52
CLDN6P56747 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CLDN6P56747 OR11J2P-201ENST00000555298 907 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN6P56747 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN6P56747 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN6P56747 AC007683.2-201ENST00000624681 714 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 AC005225.5-201ENST00000623547 2225 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 MAPK10-261ENST00000641050 3109 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN6P56747 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CLDN6P56747 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN6P56747 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLDN6P56747 MFSD8-219ENST00000641228 2559 ntBASIC5.57□□□□□ -1.52
CLDN6P56747 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN6P56747 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CLDN6P56747 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN6P56747 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN6P56747 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN6P56747 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN6P56747 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN6P56747 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN6P56747 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN6P56747 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.56□□□□□ -1.52
CLDN6P56747 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN6P56747 AL133173.1-201ENST00000423458 397 ntBASIC5.56□□□□□ -1.52
CLDN6P56747 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN6P56747 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN6P56747 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN6P56747 OR13K1P-201ENST00000444577 975 ntBASIC5.56□□□□□ -1.52
CLDN6P56747 Z80107.2-201ENST00000445127 392 ntBASIC5.56□□□□□ -1.52
CLDN6P56747 AL022237.1-201ENST00000446663 358 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms