Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SNORA81-201ENST00000408493 178 ntBASIC4.28□□□□□ -1.72
CMC4P56277 RN7SKP279-201ENST00000411383 298 ntBASIC4.28□□□□□ -1.72
CMC4P56277 MRPL53P1-201ENST00000414323 319 ntBASIC4.28□□□□□ -1.72
CMC4P56277 AC113412.1-201ENST00000425840 504 ntBASIC4.28□□□□□ -1.72
CMC4P56277 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.28□□□□□ -1.72
CMC4P56277 GAPDHP34-201ENST00000432112 823 ntBASIC4.28□□□□□ -1.72
CMC4P56277 HMGB3P24-201ENST00000433260 622 ntBASIC4.28□□□□□ -1.72
CMC4P56277 RPL23AP19-201ENST00000436229 369 ntBASIC4.28□□□□□ -1.72
CMC4P56277 PCBP2P1-201ENST00000437262 977 ntBASIC4.28□□□□□ -1.72
CMC4P56277 RPS12P17-201ENST00000438591 377 ntBASIC4.28□□□□□ -1.72
CMC4P56277 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.28□□□□□ -1.72
CMC4P56277 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.28□□□□□ -1.72
CMC4P56277 SNORD125-201ENST00000459538 96 ntBASIC4.28□□□□□ -1.72
CMC4P56277 RPS3AP15-201ENST00000483874 781 ntBASIC4.28□□□□□ -1.72
CMC4P56277 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CMC4P56277 RNU6-615P-201ENST00000516065 106 ntBASIC4.28□□□□□ -1.72
CMC4P56277 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.28□□□□□ -1.72
CMC4P56277 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.28□□□□□ -1.72
CMC4P56277 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CMC4P56277 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CMC4P56277 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.28□□□□□ -1.72
CMC4P56277 AGGF1P7-201ENST00000562369 913 ntBASIC4.28□□□□□ -1.72
CMC4P56277 AC096996.1-201ENST00000563813 325 ntBASIC4.28□□□□□ -1.72
CMC4P56277 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.28□□□□□ -1.72
CMC4P56277 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.28□□□□□ -1.72
CMC4P56277 MIR4310-201ENST00000582950 57 ntBASIC4.28□□□□□ -1.72
CMC4P56277 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
CMC4P56277 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.28□□□□□ -1.72
CMC4P56277 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.28□□□□□ -1.72
CMC4P56277 AC100767.2-201ENST00000604840 693 ntBASIC4.28□□□□□ -1.72
CMC4P56277 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.28□□□□□ -1.72
CMC4P56277 AC244517.3-201ENST00000616254 1235 ntBASIC4.28□□□□□ -1.72
CMC4P56277 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.28□□□□□ -1.72
CMC4P56277 AP001962.1-201ENST00000624114 559 ntBASIC4.28□□□□□ -1.72
CMC4P56277 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.28□□□□□ -1.72
CMC4P56277 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.28□□□□□ -1.72
CMC4P56277 MIR193BHG-214ENST00000641765 509 ntBASIC4.28□□□□□ -1.72
CMC4P56277 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.28□□□□□ -1.72
CMC4P56277 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CMC4P56277 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CMC4P56277 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CMC4P56277 Z95331.1-201ENST00000623075 23112 ntBASIC4.28□□□□□ -1.72
CMC4P56277 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC4.28□□□□□ -1.72
CMC4P56277 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
CMC4P56277 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.28□□□□□ -1.72
CMC4P56277 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CMC4P56277 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CMC4P56277 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC4.28□□□□□ -1.72
CMC4P56277 AC093829.1-201ENST00000506662 1618 ntBASIC4.28□□□□□ -1.72
CMC4P56277 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CMC4P56277 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CMC4P56277 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
CMC4P56277 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CMC4P56277 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CMC4P56277 AC005725.1-201ENST00000577346 2607 ntBASIC4.27□□□□□ -1.73
CMC4P56277 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CMC4P56277 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CMC4P56277 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CMC4P56277 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CMC4P56277 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.27□□□□□ -1.73
CMC4P56277 AC112198.2-201ENST00000426589 6996 ntBASIC4.27□□□□□ -1.73
CMC4P56277 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC4.27□□□□□ -1.73
CMC4P56277 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CMC4P56277 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.27□□□□□ -1.73
CMC4P56277 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.27□□□□□ -1.73
CMC4P56277 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.27□□□□□ -1.73
CMC4P56277 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.27□□□□□ -1.73
CMC4P56277 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CMC4P56277 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CMC4P56277 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CMC4P56277 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CMC4P56277 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CMC4P56277 RN7SKP78-201ENST00000364711 318 ntBASIC4.27□□□□□ -1.73
CMC4P56277 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.27□□□□□ -1.73
CMC4P56277 RNU1-136P-201ENST00000384181 164 ntBASIC4.27□□□□□ -1.73
CMC4P56277 RNA5SP284-201ENST00000384547 118 ntBASIC4.27□□□□□ -1.73
CMC4P56277 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CMC4P56277 RNA5SP178-201ENST00000410380 128 ntBASIC4.27□□□□□ -1.73
CMC4P56277 RPS3P2-201ENST00000421346 701 ntBASIC4.27□□□□□ -1.73
CMC4P56277 OR10T1P-201ENST00000424327 947 ntBASIC4.27□□□□□ -1.73
CMC4P56277 AC079807.1-201ENST00000429993 481 ntBASIC4.27□□□□□ -1.73
CMC4P56277 AC005297.1-201ENST00000444765 862 ntBASIC4.27□□□□□ -1.73
CMC4P56277 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.27□□□□□ -1.73
CMC4P56277 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.27□□□□□ -1.73
CMC4P56277 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.27□□□□□ -1.73
CMC4P56277 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CMC4P56277 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.27□□□□□ -1.73
CMC4P56277 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.27□□□□□ -1.73
CMC4P56277 AC007998.1-201ENST00000474156 672 ntBASIC4.27□□□□□ -1.73
CMC4P56277 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.27□□□□□ -1.73
CMC4P56277 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC4.27□□□□□ -1.73
CMC4P56277 UGT2A3P7-201ENST00000510485 734 ntBASIC4.27□□□□□ -1.73
CMC4P56277 AC114781.3-201ENST00000512083 142 ntBASIC4.27□□□□□ -1.73
CMC4P56277 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.27□□□□□ -1.73
CMC4P56277 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.27□□□□□ -1.73
CMC4P56277 PMS2P3-207ENST00000529061 717 ntBASIC4.27□□□□□ -1.73
CMC4P56277 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.27□□□□□ -1.73
CMC4P56277 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CMC4P56277 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.27□□□□□ -1.73
CMC4P56277 AL049872.1-201ENST00000556323 322 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms