Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH6P55285 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH6P55285 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
CDH6P55285 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CDH6P55285 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH6P55285 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CDH6P55285 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH6P55285 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CDH6P55285 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CDH6P55285 AC023490.2-201ENST00000359859 470 ntBASIC5.9□□□□□ -1.46
CDH6P55285 RNA5SP326-201ENST00000363209 110 ntBASIC5.9□□□□□ -1.46
CDH6P55285 AC005042.1-201ENST00000393397 800 ntBASIC5.9□□□□□ -1.46
CDH6P55285 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH6P55285 OR10T1P-201ENST00000424327 947 ntBASIC5.9□□□□□ -1.46
CDH6P55285 TMEM183AP1-205ENST00000432739 290 ntBASIC5.9□□□□□ -1.46
CDH6P55285 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH6P55285 AL512637.1-201ENST00000439523 1231 ntBASIC5.9□□□□□ -1.46
CDH6P55285 RPS23P9-201ENST00000448848 438 ntBASIC5.9□□□□□ -1.46
CDH6P55285 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH6P55285 NENFP3-201ENST00000503735 313 ntBASIC5.9□□□□□ -1.46
CDH6P55285 AC006499.4-201ENST00000510947 694 ntBASIC5.9□□□□□ -1.46
CDH6P55285 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH6P55285 AC111000.6-201ENST00000514471 709 ntBASIC5.9□□□□□ -1.46
CDH6P55285 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.9□□□□□ -1.46
CDH6P55285 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH6P55285 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.9□□□□□ -1.46
CDH6P55285 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH6P55285 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.9□□□□□ -1.46
CDH6P55285 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH6P55285 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH6P55285 AC005726.4-201ENST00000582858 458 ntBASIC5.9□□□□□ -1.46
CDH6P55285 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH6P55285 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH6P55285 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH6P55285 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH6P55285 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH6P55285 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH6P55285 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH6P55285 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.9□□□□□ -1.46
CDH6P55285 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
CDH6P55285 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH6P55285 AC025470.1-201ENST00000510053 2032 ntBASIC5.9□□□□□ -1.47
CDH6P55285 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDH6P55285 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDH6P55285 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDH6P55285 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDH6P55285 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CDH6P55285 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CDH6P55285 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDH6P55285 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH6P55285 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH6P55285 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CDH6P55285 AC087516.1-201ENST00000561236 2428 ntBASIC5.89□□□□□ -1.47
CDH6P55285 AL355488.2-201ENST00000609909 2850 ntBASIC5.89□□□□□ -1.47
CDH6P55285 AL161912.4-201ENST00000623889 2468 ntBASIC5.89□□□□□ -1.47
CDH6P55285 AC027279.4-201ENST00000624371 2072 ntBASIC5.89□□□□□ -1.47
CDH6P55285 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH6P55285 AL137058.3-201ENST00000624531 3099 ntBASIC5.89□□□□□ -1.47
CDH6P55285 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH6P55285 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CDH6P55285 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH6P55285 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH6P55285 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CDH6P55285 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH6P55285 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH6P55285 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CDH6P55285 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH6P55285 AL121886.1-201ENST00000358609 435 ntBASIC5.89□□□□□ -1.47
CDH6P55285 RPS3AP2-201ENST00000407190 754 ntBASIC5.89□□□□□ -1.47
CDH6P55285 HMGN1P20-201ENST00000411849 300 ntBASIC5.89□□□□□ -1.47
CDH6P55285 RPS6P23-201ENST00000413224 722 ntBASIC5.89□□□□□ -1.47
CDH6P55285 AL354868.1-201ENST00000417077 482 ntBASIC5.89□□□□□ -1.47
CDH6P55285 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH6P55285 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH6P55285 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH6P55285 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH6P55285 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH6P55285 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH6P55285 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH6P55285 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH6P55285 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH6P55285 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH6P55285 AC022215.1-201ENST00000481770 362 ntBASIC5.89□□□□□ -1.47
CDH6P55285 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH6P55285 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH6P55285 GLUD1P3-202ENST00000508551 200 ntBASIC5.89□□□□□ -1.47
CDH6P55285 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH6P55285 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.89□□□□□ -1.47
CDH6P55285 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH6P55285 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CDH6P55285 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH6P55285 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH6P55285 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH6P55285 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH6P55285 AL121839.2-201ENST00000565058 6943 ntBASIC5.89□□□□□ -1.47
CDH6P55285 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
CDH6P55285 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH6P55285 AL355834.1-201ENST00000556602 3965 ntBASIC5.89□□□□□ -1.47
CDH6P55285 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms