Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 AC023271.1-201ENST00000445936 1090 ntBASIC6.21□□□□□ -1.42
CASP1P29466 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.21□□□□□ -1.42
CASP1P29466 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.21□□□□□ -1.42
CASP1P29466 RN7SL197P-201ENST00000466981 299 ntBASIC6.21□□□□□ -1.42
CASP1P29466 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CASP1P29466 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.21□□□□□ -1.42
CASP1P29466 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.21□□□□□ -1.42
CASP1P29466 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.21□□□□□ -1.42
CASP1P29466 SNORA43.3-201ENST00000517240 103 ntBASIC6.21□□□□□ -1.42
CASP1P29466 PMS2P3-207ENST00000529061 717 ntBASIC6.21□□□□□ -1.42
CASP1P29466 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.21□□□□□ -1.42
CASP1P29466 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.21□□□□□ -1.42
CASP1P29466 AP005403.1-201ENST00000579720 229 ntBASIC6.21□□□□□ -1.42
CASP1P29466 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.21□□□□□ -1.42
CASP1P29466 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.21□□□□□ -1.42
CASP1P29466 AL390318.1-201ENST00000624564 687 ntBASIC6.21□□□□□ -1.42
CASP1P29466 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CASP1P29466 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CASP1P29466 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CASP1P29466 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CASP1P29466 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CASP1P29466 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CASP1P29466 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.21□□□□□ -1.42
CASP1P29466 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.21□□□□□ -1.42
CASP1P29466 AC003973.3-201ENST00000624863 2822 ntBASIC6.21□□□□□ -1.42
CASP1P29466 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CASP1P29466 AC016745.2-201ENST00000608834 3443 ntBASIC6.21□□□□□ -1.42
CASP1P29466 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.2□□□□□ -1.42
CASP1P29466 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CASP1P29466 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CASP1P29466 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CASP1P29466 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CASP1P29466 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CASP1P29466 AC106872.5-201ENST00000508856 1416 ntBASIC6.2□□□□□ -1.42
CASP1P29466 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CASP1P29466 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CASP1P29466 SNORA16A-201ENST00000384342 137 ntBASIC6.2□□□□□ -1.42
CASP1P29466 IPPKP1-201ENST00000422501 768 ntBASIC6.2□□□□□ -1.42
CASP1P29466 AC007161.1-204ENST00000423039 460 ntBASIC6.2□□□□□ -1.42
CASP1P29466 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.2□□□□□ -1.42
CASP1P29466 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.2□□□□□ -1.42
CASP1P29466 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.2□□□□□ -1.42
CASP1P29466 AL359265.1-201ENST00000440296 795 ntBASIC6.2□□□□□ -1.42
CASP1P29466 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CASP1P29466 NXT1P1-201ENST00000458481 316 ntBASIC6.2□□□□□ -1.42
CASP1P29466 ABCC13-202ENST00000463099 3842 ntBASIC6.2□□□□□ -1.42
CASP1P29466 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.2□□□□□ -1.42
CASP1P29466 AC087672.1-201ENST00000479876 766 ntBASIC6.2□□□□□ -1.42
CASP1P29466 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CASP1P29466 GLUD1P3-202ENST00000508551 200 ntBASIC6.2□□□□□ -1.42
CASP1P29466 AC093815.1-201ENST00000508637 280 ntBASIC6.2□□□□□ -1.42
CASP1P29466 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
CASP1P29466 RNU6-615P-201ENST00000516065 106 ntBASIC6.2□□□□□ -1.42
CASP1P29466 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.2□□□□□ -1.42
CASP1P29466 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.2□□□□□ -1.42
CASP1P29466 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.2□□□□□ -1.42
CASP1P29466 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CASP1P29466 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.2□□□□□ -1.42
CASP1P29466 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.2□□□□□ -1.42
CASP1P29466 AC005726.4-201ENST00000582858 458 ntBASIC6.2□□□□□ -1.42
CASP1P29466 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.2□□□□□ -1.42
CASP1P29466 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.2□□□□□ -1.42
CASP1P29466 AC007786.3-201ENST00000615154 596 ntBASIC6.2□□□□□ -1.42
CASP1P29466 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.2□□□□□ -1.42
CASP1P29466 AL359715.3-201ENST00000569267 2123 ntBASIC6.2□□□□□ -1.42
CASP1P29466 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CASP1P29466 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CASP1P29466 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CASP1P29466 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CASP1P29466 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CASP1P29466 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CASP1P29466 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.2□□□□□ -1.42
CASP1P29466 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.2□□□□□ -1.42
CASP1P29466 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CASP1P29466 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASP1P29466 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CASP1P29466 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.19□□□□□ -1.42
CASP1P29466 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASP1P29466 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CASP1P29466 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CASP1P29466 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CASP1P29466 AC114786.1-201ENST00000512892 1415 ntBASIC6.19□□□□□ -1.42
CASP1P29466 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
CASP1P29466 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.19□□□□□ -1.42
CASP1P29466 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CASP1P29466 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CASP1P29466 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASP1P29466 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASP1P29466 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASP1P29466 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CASP1P29466 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CASP1P29466 RPL7P58-201ENST00000402913 758 ntBASIC6.19□□□□□ -1.42
CASP1P29466 SLC20A1P1-201ENST00000413906 956 ntBASIC6.19□□□□□ -1.42
CASP1P29466 RNF10P1-201ENST00000418589 369 ntBASIC6.19□□□□□ -1.42
CASP1P29466 RPS3P2-201ENST00000421346 701 ntBASIC6.19□□□□□ -1.42
CASP1P29466 RPL7P56-201ENST00000429441 717 ntBASIC6.19□□□□□ -1.42
CASP1P29466 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.19□□□□□ -1.42
CASP1P29466 EEF1B2P6-201ENST00000445713 673 ntBASIC6.19□□□□□ -1.42
CASP1P29466 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.19□□□□□ -1.42
CASP1P29466 VDAC2P4-201ENST00000452925 711 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms