Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC2.4□□□□□ -2.03
USH2AO75445 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 MBP-206ENST00000397863 4800 ntTSL 3 BASIC2.4□□□□□ -2.03
USH2AO75445 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC2.4□□□□□ -2.03
USH2AO75445 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
USH2AO75445 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC2.4□□□□□ -2.03
USH2AO75445 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC2.4□□□□□ -2.03
USH2AO75445 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
USH2AO75445 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
USH2AO75445 HSFY1P1-201ENST00000423928 1178 ntBASIC2.4□□□□□ -2.03
USH2AO75445 RPS4XP16-201ENST00000427198 791 ntBASIC2.4□□□□□ -2.03
USH2AO75445 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.4□□□□□ -2.03
USH2AO75445 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC2.4□□□□□ -2.03
USH2AO75445 AC244502.2-201ENST00000543361 851 ntBASIC2.4□□□□□ -2.03
USH2AO75445 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 AC073365.1-203ENST00000641055 1992 ntBASIC2.4□□□□□ -2.03
USH2AO75445 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
USH2AO75445 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC2.4□□□□□ -2.03
USH2AO75445 KIAA1644-201ENST00000381176 6751 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
USH2AO75445 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
USH2AO75445 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
USH2AO75445 POT1-202ENST00000393329 3950 ntTSL 5 BASIC2.4□□□□□ -2.03
USH2AO75445 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
USH2AO75445 TECPR2-201ENST00000359520 8686 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
USH2AO75445 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC2.39□□□□□ -2.03
USH2AO75445 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC2.39□□□□□ -2.03
USH2AO75445 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 MIR133B-201ENST00000362210 119 ntBASIC2.39□□□□□ -2.03
USH2AO75445 RN7SL542P-201ENST00000467147 294 ntBASIC2.39□□□□□ -2.03
USH2AO75445 AC096754.1-201ENST00000508904 818 ntBASIC2.39□□□□□ -2.03
USH2AO75445 TOMM22P4-201ENST00000511318 336 ntBASIC2.39□□□□□ -2.03
USH2AO75445 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 AL121873.1-201ENST00000616013 524 ntBASIC2.39□□□□□ -2.03
USH2AO75445 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC2.39□□□□□ -2.03
USH2AO75445 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC2.39□□□□□ -2.03
USH2AO75445 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 KIAA0513-206ENST00000566428 7772 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC2.39□□□□□ -2.03
USH2AO75445 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
USH2AO75445 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 SCN10A-201ENST00000449082 6418 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 RNU1-146P-201ENST00000364015 165 ntBASIC2.39□□□□□ -2.03
USH2AO75445 DBIP1-201ENST00000401435 260 ntBASIC2.39□□□□□ -2.03
USH2AO75445 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC2.39□□□□□ -2.03
USH2AO75445 AC114814.2-201ENST00000419195 485 ntBASIC2.39□□□□□ -2.03
USH2AO75445 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 RPL7L1P11-201ENST00000446092 721 ntBASIC2.39□□□□□ -2.03
USH2AO75445 AC097484.1-201ENST00000471148 389 ntBASIC2.39□□□□□ -2.03
USH2AO75445 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC2.39□□□□□ -2.03
USH2AO75445 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC2.39□□□□□ -2.03
USH2AO75445 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
USH2AO75445 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 OR9K1P-202ENST00000641111 3217 ntBASIC2.39□□□□□ -2.03
USH2AO75445 AC108751.5-201ENST00000492880 1336 ntBASIC2.39□□□□□ -2.03
USH2AO75445 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH2AO75445 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 RNU4ATAC2P-201ENST00000408674 126 ntBASIC2.39□□□□□ -2.03
USH2AO75445 AC007559.1-201ENST00000428736 355 ntBASIC2.39□□□□□ -2.03
USH2AO75445 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC2.39□□□□□ -2.03
USH2AO75445 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC2.39□□□□□ -2.03
USH2AO75445 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC2.39□□□□□ -2.03
USH2AO75445 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.39□□□□□ -2.03
USH2AO75445 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.39□□□□□ -2.03
USH2AO75445 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 209.2 ms