Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.47□□□□□ -1.53
HCN1O60741 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.47□□□□□ -1.53
HCN1O60741 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.47□□□□□ -1.53
HCN1O60741 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.47□□□□□ -1.53
HCN1O60741 AL031601.1-201ENST00000605702 394 ntBASIC5.47□□□□□ -1.53
HCN1O60741 AL022394.1-201ENST00000606979 292 ntBASIC5.47□□□□□ -1.53
HCN1O60741 MIR6809-201ENST00000612189 116 ntBASIC5.47□□□□□ -1.53
HCN1O60741 AC026124.2-201ENST00000621847 656 ntBASIC5.47□□□□□ -1.53
HCN1O60741 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.47□□□□□ -1.53
HCN1O60741 AC079776.5-201ENST00000641920 211 ntBASIC5.47□□□□□ -1.53
HCN1O60741 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HCN1O60741 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HCN1O60741 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HCN1O60741 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.47□□□□□ -1.53
HCN1O60741 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HCN1O60741 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HCN1O60741 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.47□□□□□ -1.53
HCN1O60741 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HCN1O60741 AC005224.3-201ENST00000584683 2140 ntBASIC5.47□□□□□ -1.53
HCN1O60741 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HCN1O60741 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HCN1O60741 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HCN1O60741 AF287957.1-201ENST00000607368 1595 ntBASIC5.46□□□□□ -1.53
HCN1O60741 AC004076.2-201ENST00000620532 3323 ntBASIC5.46□□□□□ -1.53
HCN1O60741 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.46□□□□□ -1.53
HCN1O60741 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HCN1O60741 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
HCN1O60741 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.46□□□□□ -1.53
HCN1O60741 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.46□□□□□ -1.54
HCN1O60741 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HCN1O60741 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HCN1O60741 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
HCN1O60741 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HCN1O60741 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
HCN1O60741 OR10R3P-201ENST00000361688 942 ntBASIC5.46□□□□□ -1.54
HCN1O60741 RNA5SP510-201ENST00000364697 99 ntBASIC5.46□□□□□ -1.54
HCN1O60741 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HCN1O60741 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HCN1O60741 AL445213.1-201ENST00000412589 747 ntBASIC5.46□□□□□ -1.54
HCN1O60741 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.46□□□□□ -1.54
HCN1O60741 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.46□□□□□ -1.54
HCN1O60741 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.46□□□□□ -1.54
HCN1O60741 RPL23AP19-201ENST00000436229 369 ntBASIC5.46□□□□□ -1.54
HCN1O60741 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.46□□□□□ -1.54
HCN1O60741 AL512605.1-202ENST00000441919 381 ntBASIC5.46□□□□□ -1.54
HCN1O60741 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.46□□□□□ -1.54
HCN1O60741 AL359955.2-201ENST00000445380 353 ntBASIC5.46□□□□□ -1.54
HCN1O60741 GEMIN2P1-201ENST00000454246 752 ntBASIC5.46□□□□□ -1.54
HCN1O60741 AC011476.1-201ENST00000466725 307 ntBASIC5.46□□□□□ -1.54
HCN1O60741 AC023245.1-201ENST00000468501 517 ntBASIC5.46□□□□□ -1.54
HCN1O60741 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.46□□□□□ -1.54
HCN1O60741 AC079080.1-201ENST00000479841 822 ntBASIC5.46□□□□□ -1.54
HCN1O60741 DEFB109A-201ENST00000482450 265 ntBASIC5.46□□□□□ -1.54
HCN1O60741 RPL7P51-201ENST00000490532 749 ntBASIC5.46□□□□□ -1.54
HCN1O60741 NPM1P28-201ENST00000492269 840 ntBASIC5.46□□□□□ -1.54
HCN1O60741 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.46□□□□□ -1.54
HCN1O60741 AC105420.1-201ENST00000504389 582 ntBASIC5.46□□□□□ -1.54
HCN1O60741 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.46□□□□□ -1.54
HCN1O60741 AC006499.4-201ENST00000510947 694 ntBASIC5.46□□□□□ -1.54
HCN1O60741 RN7SKP288-201ENST00000516227 268 ntBASIC5.46□□□□□ -1.54
HCN1O60741 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HCN1O60741 AC110056.1-201ENST00000525759 911 ntBASIC5.46□□□□□ -1.54
HCN1O60741 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.46□□□□□ -1.54
HCN1O60741 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.46□□□□□ -1.54
HCN1O60741 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.46□□□□□ -1.54
HCN1O60741 AC008521.2-201ENST00000591021 259 ntBASIC5.46□□□□□ -1.54
HCN1O60741 AC002069.2-201ENST00000603580 883 ntBASIC5.46□□□□□ -1.54
HCN1O60741 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.46□□□□□ -1.54
HCN1O60741 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.46□□□□□ -1.54
HCN1O60741 AL357153.4-201ENST00000620487 1016 ntBASIC5.46□□□□□ -1.54
HCN1O60741 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.46□□□□□ -1.54
HCN1O60741 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.46□□□□□ -1.54
HCN1O60741 AC008691.1-209ENST00000642094 814 ntBASIC5.46□□□□□ -1.54
HCN1O60741 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HCN1O60741 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.46□□□□□ -1.54
HCN1O60741 PSG10P-201ENST00000501199 1500 ntBASIC5.46□□□□□ -1.54
HCN1O60741 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.46□□□□□ -1.54
HCN1O60741 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HCN1O60741 AC004158.1-201ENST00000564508 4319 ntBASIC5.46□□□□□ -1.54
HCN1O60741 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HCN1O60741 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HCN1O60741 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HCN1O60741 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HCN1O60741 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HCN1O60741 MTCO1P46-201ENST00000451639 1491 ntBASIC5.45□□□□□ -1.54
HCN1O60741 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HCN1O60741 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HCN1O60741 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.45□□□□□ -1.54
HCN1O60741 AC114774.1-201ENST00000507410 1770 ntBASIC5.45□□□□□ -1.54
HCN1O60741 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HCN1O60741 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HCN1O60741 AC027088.4-201ENST00000611559 1947 ntBASIC5.45□□□□□ -1.54
HCN1O60741 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
HCN1O60741 AL161756.3-201ENST00000641216 2071 ntBASIC5.45□□□□□ -1.54
HCN1O60741 MTHFD2P5-201ENST00000320415 844 ntBASIC5.45□□□□□ -1.54
HCN1O60741 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HCN1O60741 RN7SKP81-201ENST00000365603 331 ntBASIC5.45□□□□□ -1.54
HCN1O60741 SNORA5.1-201ENST00000384275 131 ntBASIC5.45□□□□□ -1.54
HCN1O60741 LYPLA1P3-201ENST00000402650 695 ntBASIC5.45□□□□□ -1.54
HCN1O60741 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms