Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AL512593.1-201ENST00000444758 779 ntBASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AL445665.1-202ENST00000452436 324 ntBASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 RPL23AP40-201ENST00000487630 390 ntBASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AC135626.1-201ENST00000556983 435 ntBASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AC010487.1-201ENST00000594408 1172 ntBASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 COX6CP7-201ENST00000597056 208 ntBASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AL136131.3-201ENST00000607600 188 ntBASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AL356752.1-201ENST00000615844 593 ntBASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AP005431.1-201ENST00000618479 319 ntBASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 MAPK10-350ENST00000641777 965 ntBASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AL121768.1-201ENST00000613917 2544 ntBASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AC093671.1-201ENST00000624981 2929 ntBASIC5.41□□□□□ -1.54
NPIPA2E9PIF3 AC016583.1-201ENST00000624221 2431 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AC005225.5-201ENST00000623547 2225 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 PARP4P2-201ENST00000446672 3326 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 MTCO1P11-201ENST00000429111 1528 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 RPL35AP3-201ENST00000414680 288 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 BX119321.1-201ENST00000428912 797 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AL731534.1-201ENST00000434711 269 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 H3F3BP1-201ENST00000440551 403 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 HMGN1P36-201ENST00000446623 298 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 GEMIN2P1-201ENST00000454246 752 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AL445687.2-201ENST00000458156 728 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 CCDC11P1-201ENST00000503137 1162 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AC110056.1-201ENST00000525759 911 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AC027544.3-201ENST00000535082 757 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 MTND2P17-201ENST00000550281 688 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AP005901.4-201ENST00000577336 569 ntBASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.4□□□□□ -1.54
NPIPA2E9PIF3 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.4□□□□□ -1.55
NPIPA2E9PIF3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
NPIPA2E9PIF3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NPIPA2E9PIF3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
NPIPA2E9PIF3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.4□□□□□ -1.55
NPIPA2E9PIF3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 RN7SKP128-201ENST00000364270 303 ntBASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 RN7SKP292-201ENST00000365522 317 ntBASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 RPS3AP2-201ENST00000407190 754 ntBASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 RN7SKP166-201ENST00000410812 305 ntBASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 AC015977.1-201ENST00000418887 292 ntBASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 NMD3P2-201ENST00000421815 761 ntBASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 AC126120.1-201ENST00000431082 470 ntBASIC5.39□□□□□ -1.55
NPIPA2E9PIF3 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms