Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 AL353719.1-201ENST00000566847 864 ntBASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 RN7SL510P-201ENST00000581311 263 ntBASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 AC083849.1-201ENST00000615227 514 ntBASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 TFP1-202ENST00000475455 1573 ntBASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 AC116351.2-201ENST00000606540 1585 ntBASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.29■■□□□ 1.16
PTCH2Q9Y6C5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 GPALPP1-207ENST00000611650 899 ntBASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 EP400NL-214ENST00000641289 2402 ntBASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC22.28■■□□□ 1.16
PTCH2Q9Y6C5 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 AC112907.2-201ENST00000448639 330 ntBASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
PTCH2Q9Y6C5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PTCH2Q9Y6C5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PTCH2Q9Y6C5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PTCH2Q9Y6C5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCH2Q9Y6C5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCH2Q9Y6C5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.26■■□□□ 1.15
PTCH2Q9Y6C5 ZNF444P1-201ENST00000559497 298 ntBASIC22.26■■□□□ 1.15
PTCH2Q9Y6C5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PTCH2Q9Y6C5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC22.26■■□□□ 1.15
PTCH2Q9Y6C5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC22.26■■□□□ 1.15
PTCH2Q9Y6C5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCH2Q9Y6C5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PTCH2Q9Y6C5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PTCH2Q9Y6C5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTCH2Q9Y6C5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PTCH2Q9Y6C5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PTCH2Q9Y6C5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PTCH2Q9Y6C5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.25■■□□□ 1.15
PTCH2Q9Y6C5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.25■■□□□ 1.15
PTCH2Q9Y6C5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.25■■□□□ 1.15
PTCH2Q9Y6C5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PTCH2Q9Y6C5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.25■■□□□ 1.15
PTCH2Q9Y6C5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PTCH2Q9Y6C5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.25■■□□□ 1.15
PTCH2Q9Y6C5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCH2Q9Y6C5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms