Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 AC097493.4-201ENST00000641197 219 ntBASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA3Q9Y5H0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 AL355075.4-201ENST00000554988 638 ntBASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 MIR2861-201ENST00000636310 90 ntBASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA3Q9Y5H0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 TSPY15P-201ENST00000457163 923 ntBASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 AC012306.2-201ENST00000609350 630 ntBASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 AC133561.5-201ENST00000635547 218 ntBASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHGA3Q9Y5H0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA3Q9Y5H0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA3Q9Y5H0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHGA3Q9Y5H0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.08■□□□□ 0.65
PCDHGA3Q9Y5H0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
PCDHGA3Q9Y5H0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA3Q9Y5H0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PCDHGA3Q9Y5H0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA3Q9Y5H0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PCDHGA3Q9Y5H0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHGA3Q9Y5H0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGA3Q9Y5H0 AF186192.3-201ENST00000583427 947 ntBASIC19.08■□□□□ 0.64
PCDHGA3Q9Y5H0 AC026471.5-201ENST00000615068 467 ntBASIC19.08■□□□□ 0.64
PCDHGA3Q9Y5H0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDHGA3Q9Y5H0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGA3Q9Y5H0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGA3Q9Y5H0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA3Q9Y5H0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA3Q9Y5H0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA3Q9Y5H0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHGA3Q9Y5H0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 GABARAPL3-202ENST00000624044 1851 ntBASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 HTR7P1-201ENST00000538670 1336 ntBASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA3Q9Y5H0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms