Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA4Q9Y5G9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 AC020907.5-201ENST00000624372 1936 ntBASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
PCDHGA4Q9Y5G9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 POM121L13P-201ENST00000422362 380 ntBASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 AC010331.1-201ENST00000611423 582 ntBASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA4Q9Y5G9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA4Q9Y5G9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PCDHGA4Q9Y5G9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDHGA4Q9Y5G9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDHGA4Q9Y5G9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PCDHGA4Q9Y5G9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PCDHGA4Q9Y5G9 GABARAPL3-202ENST00000624044 1851 ntBASIC19.33■□□□□ 0.69
PCDHGA4Q9Y5G9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA4Q9Y5G9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDHGA4Q9Y5G9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA4Q9Y5G9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGA4Q9Y5G9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA4Q9Y5G9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA4Q9Y5G9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PCDHGA4Q9Y5G9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHGA4Q9Y5G9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGA4Q9Y5G9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA4Q9Y5G9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA4Q9Y5G9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA4Q9Y5G9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA4Q9Y5G9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA4Q9Y5G9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms